Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 TRAV15-201ENST00000556680 249 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC022146.1-201ENST00000595307 847 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC007423.1-201ENST00000605009 627 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC010200.2-201ENST00000605098 235 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL450489.1-201ENST00000612071 468 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC018816.2-201ENST00000621460 353 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL138785.1-201ENST00000425821 331 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC005326.1-201ENST00000429197 123 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 ATP5JP1-201ENST00000431631 322 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 NDUFA5P10-201ENST00000432147 357 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 MTND2P21-201ENST00000436242 1042 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL353093.1-201ENST00000441292 436 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL591503.2-201ENST00000442314 1005 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL157827.1-201ENST00000447622 132 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 HMGB1P5-202ENST00000451497 985 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC093663.2-201ENST00000484625 313 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 SETP14-201ENST00000497538 873 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 MTND3P24-201ENST00000506306 329 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 OR8X1P-201ENST00000534542 869 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC005242.1-201ENST00000585658 438 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC005776.1-201ENST00000603164 290 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC009948.4-201ENST00000604692 675 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 KATNBL1P5-201ENST00000605015 517 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC103798.2-201ENST00000624292 632 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL732372.2-225ENST00000642124 456 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC000367.1-201ENST00000452711 1766 ntBASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TMX2-CTNND1H3BSU7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 Y_RNA.111-201ENST00000363248 100 ntBASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL158071.1-201ENST00000430315 461 ntBASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC006028.1-201ENST00000438379 402 ntBASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC007000.2-201ENST00000442564 487 ntBASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 SETP6-201ENST00000479329 568 ntBASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 ACTG1P13-201ENST00000486987 1043 ntBASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 MTND1P36-201ENST00000522384 936 ntBASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC090079.2-201ENST00000575289 768 ntBASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 MIR5047-201ENST00000579212 100 ntBASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL133383.2-201ENST00000622958 2336 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 RNU4-35P-201ENST00000362588 141 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 RNU6-252P-201ENST00000363232 107 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 RNU6-792P-201ENST00000363490 107 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 PTGES3P2-201ENST00000407942 482 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 RNU6-55P-201ENST00000411092 107 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 RNU6-954P-201ENST00000411355 107 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms