Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC092354.1-201ENST00000606057 376 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 MIR6780A-201ENST00000615089 68 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AL356266.1-201ENST00000623311 483 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC040168.1-201ENST00000623594 991 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 CR381670.1-201ENST00000624291 1693 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AL359922.3-201ENST00000624779 1670 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AC021242.1-201ENST00000507315 2035 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 RNU6-501P-201ENST00000364072 100 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 SNORD51-201ENST00000384320 80 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AC007066.1-201ENST00000392902 381 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 MIR1305-201ENST00000408300 86 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 RN7SKP216-201ENST00000411050 312 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 MTND2P4-201ENST00000445034 1004 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 Z95327.1-201ENST00000446082 482 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AL031584.1-201ENST00000447169 754 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AC009961.3-201ENST00000449832 765 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 RPS27AP8-201ENST00000452665 445 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 ZNF114P1-201ENST00000453500 292 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AC090142.1-201ENST00000465776 462 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 SETP11-201ENST00000473027 690 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AC093267.1-201ENST00000489176 961 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 RPS4XP15-201ENST00000489210 795 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 RNU6-27P-201ENST00000516146 107 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AL353997.4-201ENST00000586196 166 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 BNIP3P23-201ENST00000599655 511 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AC107214.2-201ENST00000608204 634 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 uc_338.18-201ENST00000615451 175 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AL596245.1-201ENST00000618994 362 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 MIR6853-201ENST00000619642 74 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 AC015871.5-202ENST00000623252 701 ntBASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A3BPQ9Y5P4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 RNU6-989P-201ENST00000362756 107 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 SNORA56-201ENST00000383966 129 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 MIR298-201ENST00000401212 88 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 HSPD1P16-201ENST00000402302 394 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AP000580.1-201ENST00000404439 358 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 E2F6P2-201ENST00000420708 748 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 COX6CP17-201ENST00000421389 185 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AL645608.4-201ENST00000423619 154 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC007742.1-201ENST00000425789 329 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AL512649.1-201ENST00000428997 581 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 NMNAT1P2-201ENST00000435192 860 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 ELOCP26-201ENST00000436067 329 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC004938.1-201ENST00000438468 308 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AL138878.2-201ENST00000440581 1241 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 RPL7P52-201ENST00000449200 742 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 snoU13.8-201ENST00000458890 104 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AL591473.1-201ENST00000464297 313 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC006499.5-201ENST00000505037 514 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC022447.3-201ENST00000506865 495 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 213.1 ms