Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AP000949.1-201ENST00000438328 629 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 TPTE2P6-202ENST00000445572 1007 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 MOB1AP2-201ENST00000446060 614 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC068135.1-201ENST00000446164 246 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 RPS3AP46-201ENST00000448352 682 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 ELOCP12-201ENST00000458706 328 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 RPL32P14-201ENST00000463196 378 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AL035404.1-201ENST00000497982 568 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 HMGB1P21-201ENST00000502313 581 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 PAICSP4-201ENST00000517543 1253 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AP006245.1-201ENST00000522549 120 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC004024.1-201ENST00000549244 247 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC027104.1-201ENST00000563702 681 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AP003117.1-201ENST00000602771 554 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC112230.1-201ENST00000604342 547 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AP003117.2-201ENST00000606010 545 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 STMN1P1-201ENST00000617809 440 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AP000720.1-201ENST00000625091 483 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
TRAPPC4Q9Y296 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
TRAPPC4Q9Y296 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 ENSAP3-201ENST00000312710 333 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 RNA5SP235-201ENST00000365411 114 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 RNA5SP167-201ENST00000365461 116 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 RNU6-481P-201ENST00000384194 107 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 CYCSP19-201ENST00000411715 316 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AL445183.3-201ENST00000414168 502 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 BX664727.1-201ENST00000416024 466 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 RPL36AP36-201ENST00000418616 301 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 RPL31P45-201ENST00000419532 356 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 GLRXP1-201ENST00000423261 334 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 BX890604.2-201ENST00000427883 474 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 MTCO1P43-201ENST00000431831 488 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 NDUFB1P1-201ENST00000435191 180 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AL645931.1-201ENST00000439737 410 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 HMGN2P7-201ENST00000456186 273 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 RPL37P3-201ENST00000456825 293 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 SNORD105B-201ENST00000458770 79 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AP001086.1-201ENST00000494882 321 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 RNA5SP380-201ENST00000517190 98 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC068657.1-201ENST00000520807 306 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC083923.1-201ENST00000523708 376 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 TRAV15-201ENST00000556680 249 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC093510.2-201ENST00000562820 896 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC124283.4-201ENST00000581815 456 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AL020997.2-201ENST00000602607 184 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC125494.3-201ENST00000602759 455 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC098483.2-201ENST00000603158 454 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC245100.7-201ENST00000609678 442 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC092574.1-201ENST00000609771 420 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 VN1R9P-201ENST00000614184 867 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 AC138649.5-201ENST00000637456 137 ntBASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.27□□□□□ -1.89
TRAPPC4Q9Y296 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms