Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC104581.5-201ENST00000624171 7141 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 UG0898H09-202ENST00000623646 7040 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 AC092692.1-201ENST00000623625 2595 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 RNU6-984P-201ENST00000363236 109 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 SNORA43.1-201ENST00000364863 140 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 Y_RNA.398-201ENST00000383952 99 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 MIR433-201ENST00000384837 93 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 AC023141.3-201ENST00000436698 278 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 RN7SL221P-201ENST00000466190 281 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 RN7SL809P-201ENST00000482040 297 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 AP005639.1-201ENST00000526939 192 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 MIR4643-201ENST00000577473 78 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 NPIPB1P-202ENST00000588786 828 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 U6.106-201ENST00000636360 105 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
TRIM35Q9UPQ4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC8.15□□□□□ -1.11
TRIM35Q9UPQ4 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
TRIM35Q9UPQ4 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
TRIM35Q9UPQ4 AC006484.1-201ENST00000435086 1884 ntBASIC8.15□□□□□ -1.11
TRIM35Q9UPQ4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
TRIM35Q9UPQ4 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
TRIM35Q9UPQ4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC8.15□□□□□ -1.11
TRIM35Q9UPQ4 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
TRIM35Q9UPQ4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 SNORD81.1-201ENST00000363064 77 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 Y_RNA.273-201ENST00000364703 102 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 SNORA23-201ENST00000365128 182 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 RPL23AP25-201ENST00000430973 463 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC007679.3-201ENST00000434035 414 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 PNKDP1-201ENST00000435914 430 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AL031274.1-201ENST00000450334 232 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 CBX1P2-201ENST00000453841 458 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 RN7SL165P-201ENST00000477476 291 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC096745.1-201ENST00000509945 370 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 SNORA14.1-201ENST00000516113 141 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 IGHV1-14-201ENST00000523391 241 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC006512.2-201ENST00000543250 486 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AL359219.2-201ENST00000555184 348 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC026826.3-201ENST00000561747 158 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 LARP7P2-201ENST00000575306 125 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 MIR4502-201ENST00000580432 81 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC073593.1-201ENST00000624500 411 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC055839.1-201ENST00000634467 498 ntBASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC8.14□□□□□ -1.11
TRIM35Q9UPQ4 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 RNU6-1127P-201ENST00000384580 107 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 AC004386.1-201ENST00000393214 761 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 RN7SKP51-201ENST00000410781 304 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 NMD3P2-201ENST00000421815 761 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 CEACAMP7-201ENST00000444105 496 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 AC091179.1-201ENST00000461606 579 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms