Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 AC136618.2-201ENST00000575091 400 ntBASIC4.54□□□□□ -1.68
VPS4AQ9UN37 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 MIR4715-201ENST00000584117 79 ntBASIC4.54□□□□□ -1.68
VPS4AQ9UN37 AC107982.3-201ENST00000584957 985 ntBASIC4.54□□□□□ -1.68
VPS4AQ9UN37 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 AC073544.2-201ENST00000601155 540 ntBASIC4.54□□□□□ -1.68
VPS4AQ9UN37 AC103792.1-201ENST00000603591 919 ntBASIC4.54□□□□□ -1.68
VPS4AQ9UN37 AL596327.1-201ENST00000603629 213 ntBASIC4.54□□□□□ -1.68
VPS4AQ9UN37 MTCYBP22-201ENST00000603788 447 ntBASIC4.54□□□□□ -1.68
VPS4AQ9UN37 AC092354.1-201ENST00000606057 376 ntBASIC4.54□□□□□ -1.68
VPS4AQ9UN37 AL023881.1-201ENST00000621088 301 ntBASIC4.54□□□□□ -1.68
VPS4AQ9UN37 AC008443.7-201ENST00000622195 246 ntBASIC4.54□□□□□ -1.68
VPS4AQ9UN37 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 AC107081.3-201ENST00000612715 2034 ntBASIC4.54□□□□□ -1.68
VPS4AQ9UN37 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.54□□□□□ -1.68
VPS4AQ9UN37 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS4AQ9UN37 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 ZNF37BP-203ENST00000452306 1352 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 DDX43P2-201ENST00000604753 1354 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AL136164.3-201ENST00000624429 3978 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC092435.4-201ENST00000623012 4159 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 OR4A15-201ENST00000314706 1035 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 RNA5SP388-201ENST00000362584 119 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 RNU6-433P-201ENST00000363216 104 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 Y_RNA.302-201ENST00000364997 102 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC019155.1-201ENST00000382242 574 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 SNORA48.7-201ENST00000391302 135 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 CEACAMP8-201ENST00000413902 580 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 BX510359.2-201ENST00000417920 305 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 RPS27AP7-201ENST00000422792 455 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC004975.1-201ENST00000428733 208 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 CEACAMP1-201ENST00000434624 1035 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC104651.2-201ENST00000447549 528 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 RPL23AP35-201ENST00000451906 501 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 KATNBL1P6-201ENST00000453433 915 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC072039.1-201ENST00000477611 581 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC090013.1-201ENST00000485147 480 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC083829.1-201ENST00000503756 657 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC010424.1-201ENST00000506336 297 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC006499.2-201ENST00000513470 337 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 RNA5SP392-201ENST00000516905 112 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC008802.1-201ENST00000519121 791 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 DEFB131D-201ENST00000526803 184 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 CYCSP28-201ENST00000534284 321 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC068446.3-201ENST00000555285 382 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC093249.4-201ENST00000564755 259 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC012414.6-201ENST00000568241 401 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 KPNA2P3-201ENST00000584190 848 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 RSL24D1P11-201ENST00000591045 491 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC090116.1-201ENST00000615679 446 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC009509.4-201ENST00000619202 509 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 AC006927.3-201ENST00000638789 384 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.53□□□□□ -1.68
VPS4AQ9UN37 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VPS4AQ9UN37 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms