Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 uc_338.25-201ENST00000613756 156 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AL162574.2-201ENST00000614618 657 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 HSPA8P17-201ENST00000427029 1382 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 MTND5P19-201ENST00000424872 1794 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 U3.19-201ENST00000390893 196 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 SNORA11.2-201ENST00000408318 127 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 HMGB3P23-201ENST00000414981 585 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AIMP1P1-201ENST00000418670 937 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AL513175.1-201ENST00000431492 780 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AC006994.1-201ENST00000438212 839 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 SNRPGP5-201ENST00000456003 220 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 MTND6P32-201ENST00000457611 483 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AC087385.1-201ENST00000475062 312 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 NDUFB4P9-201ENST00000511646 388 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 RN7SKP289-201ENST00000517244 295 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 HIGD1AP10-201ENST00000527837 282 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AC027807.1-201ENST00000559921 996 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 BNIP3P19-201ENST00000605397 577 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AC015849.2-201ENST00000605738 409 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AC012531.5-201ENST00000611375 151 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AC092628.2-201ENST00000622492 339 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AP006248.2-201ENST00000623309 592 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC88CQ9P219 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 BX005019.1-201ENST00000561881 1810 ntBASIC2.96□□□□□ -1.94
CCDC88CQ9P219 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 RNU6-146P-201ENST00000384602 108 ntBASIC2.96□□□□□ -1.94
CCDC88CQ9P219 SNORA46-201ENST00000384762 135 ntBASIC2.96□□□□□ -1.94
CCDC88CQ9P219 TAF9BP1-201ENST00000396646 746 ntBASIC2.96□□□□□ -1.94
CCDC88CQ9P219 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 AL353597.2-202ENST00000434901 373 ntBASIC2.96□□□□□ -1.94
CCDC88CQ9P219 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 AL035551.1-201ENST00000446931 348 ntBASIC2.96□□□□□ -1.94
CCDC88CQ9P219 RPL5P24-201ENST00000463742 885 ntBASIC2.96□□□□□ -1.94
CCDC88CQ9P219 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 AC080014.1-201ENST00000496877 1201 ntBASIC2.96□□□□□ -1.94
CCDC88CQ9P219 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 SNORA70.19-201ENST00000516717 90 ntBASIC2.96□□□□□ -1.94
CCDC88CQ9P219 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 AC010680.3-201ENST00000604215 520 ntBASIC2.96□□□□□ -1.94
CCDC88CQ9P219 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC88CQ9P219 PHKBP1-201ENST00000450951 1951 ntBASIC2.96□□□□□ -1.94
CCDC88CQ9P219 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 AC073325.2-201ENST00000339545 159 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 RNA5SP107-201ENST00000411358 122 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 AL139132.1-201ENST00000431587 344 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 AC105272.1-201ENST00000438604 198 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 HMGB3P11-201ENST00000440127 604 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 AC008264.1-201ENST00000447612 367 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 HSPE1P22-201ENST00000456856 327 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 AC037198.2-201ENST00000478845 733 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 VN1R81P-201ENST00000602085 372 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 IGHV3-29-201ENST00000604817 344 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 UBA52P6-201ENST00000399822 382 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 AC006960.1-201ENST00000419980 153 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 MTND4LP13-201ENST00000425022 298 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 USP9YP7-201ENST00000436723 430 ntBASIC2.95□□□□□ -1.94
CCDC88CQ9P219 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC88CQ9P219 USP9YP32-201ENST00000452432 430 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms