Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.8□□□□□ -1.8
UBQLN3Q9H347 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.8□□□□□ -1.8
UBQLN3Q9H347 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.8□□□□□ -1.8
UBQLN3Q9H347 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.8□□□□□ -1.8
UBQLN3Q9H347 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.8□□□□□ -1.8
UBQLN3Q9H347 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.8□□□□□ -1.8
UBQLN3Q9H347 AL049838.1-201ENST00000563647 981 ntBASIC3.8□□□□□ -1.8
UBQLN3Q9H347 AC007599.1-201ENST00000568688 1174 ntBASIC3.8□□□□□ -1.8
UBQLN3Q9H347 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.8□□□□□ -1.8
UBQLN3Q9H347 VN1R79P-201ENST00000593540 513 ntBASIC3.8□□□□□ -1.8
UBQLN3Q9H347 AC027449.1-201ENST00000608890 407 ntBASIC3.8□□□□□ -1.8
UBQLN3Q9H347 AC090912.3-201ENST00000609775 533 ntBASIC3.8□□□□□ -1.8
UBQLN3Q9H347 AP000240.1-201ENST00000609910 452 ntBASIC3.8□□□□□ -1.8
UBQLN3Q9H347 ZYXP1-201ENST00000617638 118 ntBASIC3.8□□□□□ -1.8
UBQLN3Q9H347 AL158163.2-201ENST00000619110 700 ntBASIC3.8□□□□□ -1.8
UBQLN3Q9H347 AC010608.2-201ENST00000624830 470 ntBASIC3.8□□□□□ -1.8
UBQLN3Q9H347 RNA5SP196-201ENST00000625967 102 ntBASIC3.8□□□□□ -1.8
UBQLN3Q9H347 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBQLN3Q9H347 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBQLN3Q9H347 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UBQLN3Q9H347 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBQLN3Q9H347 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.8□□□□□ -1.8
UBQLN3Q9H347 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBQLN3Q9H347 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 DBF4P1-201ENST00000412976 1892 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 SAGE4P-201ENST00000442271 3381 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AP005901.5-201ENST00000545779 1796 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 SEPT7P7-201ENST00000420492 1301 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 snoZ40.1-201ENST00000364540 72 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 SNORD65.1-201ENST00000390889 71 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 SNORA3C-201ENST00000408792 125 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 MTND4P22-201ENST00000413116 1169 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AC005345.1-201ENST00000431868 217 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 HSFY6P-201ENST00000445573 403 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 RPL5P32-201ENST00000454085 879 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AL672167.3-201ENST00000465951 960 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 MIR2116-201ENST00000517221 80 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 IGHV3-32-201ENST00000519182 355 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AC107016.1-201ENST00000550463 337 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 MIR3912-201ENST00000577566 105 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 VN1R83P-201ENST00000595685 445 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AC067959.1-201ENST00000604334 379 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 RNU4-5P-201ENST00000607255 135 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 MIR6867-201ENST00000610636 67 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AL359715.5-201ENST00000623431 443 ntBASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN3Q9H347 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 RNA5SP479-201ENST00000364858 117 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 RPL31P2-201ENST00000413849 377 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC108032.1-201ENST00000416706 207 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 MTCYBP24-201ENST00000420387 1106 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 RPL7P53-201ENST00000421245 739 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 MTCO3P1-205ENST00000422088 832 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 NANOGP5-201ENST00000424456 877 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC005517.2-201ENST00000424673 553 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 VDAC1P6-201ENST00000430062 855 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms