Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MAPK10-304ENST00000641341 3984 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS11Q9H270 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS11Q9H270 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
VPS11Q9H270 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS11Q9H270 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
VPS11Q9H270 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
VPS11Q9H270 AC103591.2-201ENST00000265259 766 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS11Q9H270 RN7SKP124-201ENST00000364730 341 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 RNU6-534P-201ENST00000364877 106 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 CALM2P3-201ENST00000400429 449 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 FCF1P2-201ENST00000415284 583 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 BOLA3P4-201ENST00000418151 400 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 SDCBPP3-201ENST00000419629 891 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AC104843.2-201ENST00000427666 297 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AC073464.1-201ENST00000429823 534 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS11Q9H270 AC005534.2-201ENST00000431047 433 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 MTCYBP45-201ENST00000435243 565 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AL512286.1-201ENST00000439244 400 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS11Q9H270 USP9YP15-201ENST00000442391 422 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 RPS26P56-201ENST00000444468 240 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS11Q9H270 AC004980.3-201ENST00000447046 365 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 AL445433.1-201ENST00000457507 257 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 CYCSP34-201ENST00000458172 304 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 APOOP2-201ENST00000461561 539 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 MTND1P16-201ENST00000465177 898 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AC112206.1-201ENST00000468416 477 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS11Q9H270 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS11Q9H270 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS11Q9H270 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS11Q9H270 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS11Q9H270 HMGN1P13-201ENST00000505795 138 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS11Q9H270 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS11Q9H270 AC110792.2-201ENST00000510278 224 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS11Q9H270 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS11Q9H270 RNU6-1225P-201ENST00000516336 65 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 Y_RNA.675-201ENST00000516389 149 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
VPS11Q9H270 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS11Q9H270 ARL2BPP5-201ENST00000523141 481 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS11Q9H270 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS11Q9H270 AP001189.2-201ENST00000527320 189 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS11Q9H270 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS11Q9H270 HPRT1P3-201ENST00000539521 576 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VPS11Q9H270 NDUFB4P11-201ENST00000560510 395 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS11Q9H270 RPS3AP23-202ENST00000574601 686 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS11Q9H270 AC010928.3-201ENST00000587712 541 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AC008752.3-201ENST00000588113 712 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 VN1R79P-201ENST00000593540 513 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 TAS2R6P-201ENST00000605022 826 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS11Q9H270 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS11Q9H270 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS11Q9H270 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS11Q9H270 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS11Q9H270 AC026634.1-201ENST00000634369 198 ntBASIC5.11□□□□□ -1.59
VPS11Q9H270 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS11Q9H270 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS11Q9H270 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VPS11Q9H270 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VPS11Q9H270 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS11Q9H270 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VPS11Q9H270 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC000123.3-201ENST00000624029 4975 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS11Q9H270 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS11Q9H270 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS11Q9H270 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS11Q9H270 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VPS11Q9H270 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS11Q9H270 U3.3-201ENST00000362986 216 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms