Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 PROS2P-201ENST00000474651 1951 ntBASIC4.89□□□□□ -1.63
IFT140Q96RY7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.89□□□□□ -1.63
IFT140Q96RY7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 WASF1P1-201ENST00000447560 1131 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 MTND2P25-201ENST00000449028 610 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 MTCO3P20-201ENST00000454926 688 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 snoU13.23-201ENST00000458863 104 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 AC021205.1-201ENST00000468797 348 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 AC099489.2-201ENST00000574976 260 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 PLCE1P1-201ENST00000622094 305 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 AP003122.5-201ENST00000527668 3766 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
IFT140Q96RY7 AC104297.1-201ENST00000393779 870 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 SNORA3.2-201ENST00000408221 125 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 RN7SKP192-201ENST00000411291 327 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 RANP4-201ENST00000413361 655 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 AC099063.2-201ENST00000446360 662 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 AP000873.5-201ENST00000533906 236 ntBASIC4.88□□□□□ -1.63
IFT140Q96RY7 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT140Q96RY7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
IFT140Q96RY7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
IFT140Q96RY7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
IFT140Q96RY7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
IFT140Q96RY7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
IFT140Q96RY7 RNA5SP21-201ENST00000410917 96 ntBASIC4.87□□□□□ -1.63
IFT140Q96RY7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.87□□□□□ -1.63
IFT140Q96RY7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.87□□□□□ -1.63
IFT140Q96RY7 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.87□□□□□ -1.63
IFT140Q96RY7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.87□□□□□ -1.63
IFT140Q96RY7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.87□□□□□ -1.63
IFT140Q96RY7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.87□□□□□ -1.63
IFT140Q96RY7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.87□□□□□ -1.63
IFT140Q96RY7 AL158827.2-201ENST00000602494 330 ntBASIC4.87□□□□□ -1.63
IFT140Q96RY7 AC007566.2-201ENST00000603642 413 ntBASIC4.87□□□□□ -1.63
IFT140Q96RY7 MIR6817-201ENST00000615588 66 ntBASIC4.87□□□□□ -1.63
IFT140Q96RY7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.87□□□□□ -1.63
IFT140Q96RY7 AL691447.3-201ENST00000635020 330 ntBASIC4.87□□□□□ -1.63
IFT140Q96RY7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
IFT140Q96RY7 FAM35DP-201ENST00000323387 2712 ntBASIC4.86□□□□□ -1.63
IFT140Q96RY7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
IFT140Q96RY7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
IFT140Q96RY7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.86□□□□□ -1.63
IFT140Q96RY7 MRPS33P4-201ENST00000434892 317 ntBASIC4.86□□□□□ -1.63
IFT140Q96RY7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.86□□□□□ -1.63
IFT140Q96RY7 AC090543.2-201ENST00000483963 348 ntBASIC4.86□□□□□ -1.63
IFT140Q96RY7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.86□□□□□ -1.63
IFT140Q96RY7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.86□□□□□ -1.63
IFT140Q96RY7 AC006445.2-201ENST00000510061 472 ntBASIC4.86□□□□□ -1.63
IFT140Q96RY7 AP002770.2-201ENST00000543613 532 ntBASIC4.86□□□□□ -1.63
IFT140Q96RY7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.86□□□□□ -1.63
IFT140Q96RY7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.86□□□□□ -1.63
IFT140Q96RY7 AC091903.1-201ENST00000624322 454 ntBASIC4.86□□□□□ -1.63
IFT140Q96RY7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
IFT140Q96RY7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
IFT140Q96RY7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
IFT140Q96RY7 AC110754.1-201ENST00000399740 601 ntBASIC4.85□□□□□ -1.63
IFT140Q96RY7 RAP1BP1-201ENST00000412709 553 ntBASIC4.85□□□□□ -1.63
IFT140Q96RY7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.85□□□□□ -1.63
IFT140Q96RY7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.85□□□□□ -1.63
IFT140Q96RY7 RNU6-991P-201ENST00000516168 107 ntBASIC4.85□□□□□ -1.63
IFT140Q96RY7 IGKV3-31-201ENST00000523109 329 ntBASIC4.85□□□□□ -1.63
IFT140Q96RY7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.85□□□□□ -1.63
IFT140Q96RY7 AL008729.2-201ENST00000606393 473 ntBASIC4.85□□□□□ -1.63
IFT140Q96RY7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.85□□□□□ -1.63
IFT140Q96RY7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
IFT140Q96RY7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
IFT140Q96RY7 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
IFT140Q96RY7 RNU1-89P-201ENST00000384592 164 ntBASIC4.84□□□□□ -1.63
IFT140Q96RY7 AL445213.1-201ENST00000412589 747 ntBASIC4.84□□□□□ -1.63
IFT140Q96RY7 AL513477.1-202ENST00000417061 214 ntBASIC4.84□□□□□ -1.63
IFT140Q96RY7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.84□□□□□ -1.63
IFT140Q96RY7 AC117522.3-201ENST00000507974 584 ntBASIC4.84□□□□□ -1.63
IFT140Q96RY7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.84□□□□□ -1.63
IFT140Q96RY7 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.84□□□□□ -1.63
IFT140Q96RY7 AC092079.1-201ENST00000558620 1985 ntBASIC4.84□□□□□ -1.63
IFT140Q96RY7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.84□□□□□ -1.64
IFT140Q96RY7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
IFT140Q96RY7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.83□□□□□ -1.64
IFT140Q96RY7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
IFT140Q96RY7 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.83□□□□□ -1.64
IFT140Q96RY7 CBX1P4-201ENST00000439415 457 ntBASIC4.83□□□□□ -1.64
IFT140Q96RY7 HMGB3P11-201ENST00000440127 604 ntBASIC4.83□□□□□ -1.64
IFT140Q96RY7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.83□□□□□ -1.64
IFT140Q96RY7 RN7SL20P-201ENST00000488827 297 ntBASIC4.83□□□□□ -1.64
IFT140Q96RY7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.83□□□□□ -1.64
IFT140Q96RY7 PCBP2P3-201ENST00000509726 843 ntBASIC4.83□□□□□ -1.64
IFT140Q96RY7 SNORD53-201ENST00000579969 78 ntBASIC4.83□□□□□ -1.64
IFT140Q96RY7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.83□□□□□ -1.64
IFT140Q96RY7 AC007318.2-201ENST00000620999 243 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms