Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AC018926.3-201ENST00000618841 406 ntBASIC3.39□□□□□ -1.87
ITCHQ96J02 AP003355.3-201ENST00000623465 114 ntBASIC3.39□□□□□ -1.87
ITCHQ96J02 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.39□□□□□ -1.87
ITCHQ96J02 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ITCHQ96J02 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ITCHQ96J02 ASNSP1-204ENST00000641977 1664 ntBASIC3.39□□□□□ -1.87
ITCHQ96J02 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.39□□□□□ -1.87
ITCHQ96J02 AC046144.1-201ENST00000478559 1853 ntBASIC3.39□□□□□ -1.87
ITCHQ96J02 RIOK3P1-201ENST00000418778 1528 ntBASIC3.39□□□□□ -1.87
ITCHQ96J02 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ITCHQ96J02 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ITCHQ96J02 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ITCHQ96J02 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
ITCHQ96J02 AL512646.1-201ENST00000269395 1077 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ITCHQ96J02 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ITCHQ96J02 RNA5SP283-201ENST00000365604 119 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AP002088.1-201ENST00000382740 395 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 RNU6-1293P-201ENST00000384077 107 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 SNORA57.1-201ENST00000391227 145 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AL590704.1-201ENST00000402856 794 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ITCHQ96J02 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.38□□□□□ -1.87
ITCHQ96J02 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.38□□□□□ -1.87
ITCHQ96J02 UBE2V1P5-201ENST00000440070 405 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AL357552.1-201ENST00000445254 415 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 CDC27P1-201ENST00000445384 715 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.38□□□□□ -1.87
ITCHQ96J02 RPS3AP46-201ENST00000448352 682 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 DNAJC19P8-201ENST00000452887 259 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AC006539.3-201ENST00000454258 129 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.38□□□□□ -1.87
ITCHQ96J02 AL133162.1-201ENST00000463228 453 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 RN7SL594P-201ENST00000470590 287 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AC023598.1-201ENST00000472521 361 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AC092451.1-201ENST00000480211 153 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.38□□□□□ -1.87
ITCHQ96J02 RPL7P47-201ENST00000497299 556 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AC110768.1-201ENST00000509222 400 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 RPL7L1P13-201ENST00000511702 739 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AC011602.1-201ENST00000546484 331 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AC084824.1-201ENST00000550917 1005 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.38□□□□□ -1.87
ITCHQ96J02 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
ITCHQ96J02 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.38□□□□□ -1.87
ITCHQ96J02 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.38□□□□□ -1.87
ITCHQ96J02 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.38□□□□□ -1.87
ITCHQ96J02 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.38□□□□□ -1.87
ITCHQ96J02 BNIP3P22-201ENST00000593399 556 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AC007687.1-201ENST00000602704 304 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AC005776.1-201ENST00000603164 290 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.38□□□□□ -1.87
ITCHQ96J02 RNU6-156P-201ENST00000621869 107 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AL357559.1-201ENST00000622228 274 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AC110801.1-201ENST00000623590 212 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 AC092608.3-201ENST00000625017 386 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ITCHQ96J02 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ITCHQ96J02 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ITCHQ96J02 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ITCHQ96J02 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ITCHQ96J02 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ITCHQ96J02 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.38□□□□□ -1.87
ITCHQ96J02 GABPAP-201ENST00000419271 1356 ntBASIC3.38□□□□□ -1.87
ITCHQ96J02 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ITCHQ96J02 MTCO1P4-201ENST00000520516 1409 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ITCHQ96J02 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.37□□□□□ -1.87
ITCHQ96J02 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ITCHQ96J02 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ITCHQ96J02 MIR30E-201ENST00000362104 92 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ITCHQ96J02 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.37□□□□□ -1.87
ITCHQ96J02 SNORA11C-201ENST00000408532 129 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 RN7SKP263-201ENST00000411194 309 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.37□□□□□ -1.87
ITCHQ96J02 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.37□□□□□ -1.87
ITCHQ96J02 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
ITCHQ96J02 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.37□□□□□ -1.87
ITCHQ96J02 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.37□□□□□ -1.87
ITCHQ96J02 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.37□□□□□ -1.87
ITCHQ96J02 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.37□□□□□ -1.87
ITCHQ96J02 OR4C10P-201ENST00000434991 931 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ITCHQ96J02 RPL12P26-201ENST00000452430 487 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 HMGN2P7-201ENST00000456186 273 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 AC087312.1-201ENST00000471411 480 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 AC126121.1-201ENST00000482313 553 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 AP000563.1-201ENST00000490865 758 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 SETP14-201ENST00000497538 873 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 OR5H3P-201ENST00000502817 919 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 MTCO2P9-201ENST00000503214 694 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 AC121161.1-201ENST00000510606 652 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 AC005351.1-201ENST00000511152 786 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.37□□□□□ -1.87
ITCHQ96J02 MTCO1P35-201ENST00000515270 228 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 RNU2-58P-201ENST00000516403 183 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 SNORA70.19-201ENST00000516717 90 ntBASIC3.37□□□□□ -1.87
ITCHQ96J02 MIR2116-201ENST00000517221 80 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms