Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 FNDC3CP-201ENST00000420795 1155 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 OFD1P18Y-201ENST00000420889 959 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 RPL36AP10-201ENST00000421785 322 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 RPL34P6-201ENST00000432390 345 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC091862.1-201ENST00000438016 1100 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 SKP1P1-201ENST00000438081 489 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC005154.2-201ENST00000438110 379 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC105402.2-201ENST00000438503 358 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AL033528.1-201ENST00000453780 140 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC079168.2-201ENST00000453977 416 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 RNU7-136P-201ENST00000458819 69 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC026410.2-201ENST00000460281 156 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC025164.1-201ENST00000496249 478 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 RNA5SP228-201ENST00000516232 133 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 RN7SKP276-201ENST00000516242 268 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 IGKV1-32-201ENST00000519290 311 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 HSPA8P13-201ENST00000523715 472 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 OR5G4P-201ENST00000525251 760 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC013828.2-201ENST00000532487 235 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 UBE2FP2-201ENST00000566646 462 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 MAGOH2P-202ENST00000584384 429 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 RNF138P2-201ENST00000603490 592 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AL133338.2-201ENST00000604292 736 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AL589743.7-201ENST00000612637 233 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC116165.2-201ENST00000616705 206 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC108479.2-201ENST00000617314 601 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AL031119.1-201ENST00000404707 1879 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CTHRC1Q96CG8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CTHRC1Q96CG8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CTHRC1Q96CG8 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CTHRC1Q96CG8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CTHRC1Q96CG8 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CTHRC1Q96CG8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CTHRC1Q96CG8 AC093536.2-201ENST00000565257 1406 ntBASIC4.4□□□□□ -1.7
CTHRC1Q96CG8 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CTHRC1Q96CG8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CTHRC1Q96CG8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CTHRC1Q96CG8 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 RNU1-83P-201ENST00000363426 164 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 RNU1-82P-201ENST00000390851 165 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 SNORA40.3-201ENST00000390964 122 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 EIF5P1-201ENST00000400019 1231 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 MIR1305-201ENST00000408300 86 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 RN7SKP266-201ENST00000410232 287 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 Y_RNA.598-201ENST00000410480 95 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AL591848.1-201ENST00000413092 322 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 USP9YP13-201ENST00000417797 480 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 MTCYBP5-201ENST00000423752 1135 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 COX6CP15-201ENST00000426313 211 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC010975.2-201ENST00000427781 588 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 MTND1P4-201ENST00000435196 415 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 LSM1P1-201ENST00000438629 273 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 TDGF1P1-201ENST00000445734 527 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 MTCO1P27-201ENST00000448269 226 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC093899.1-201ENST00000457984 376 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 TPT1P7-201ENST00000458300 517 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 snoU109.1-201ENST00000459339 135 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms