Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 RNU6-1243P-201ENST00000364028 107 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 RNU6-553P-201ENST00000364047 96 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 RPS4XP9-201ENST00000405151 780 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 MIR1302-8-201ENST00000408342 128 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 RNU2-21P-201ENST00000410368 188 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AL390023.1-201ENST00000428836 262 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AL035407.1-201ENST00000429211 571 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC091390.1-201ENST00000433904 331 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 MTND6P18-201ENST00000439477 513 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 UBE2D3P4-201ENST00000441973 436 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 TRBV26-201ENST00000456572 344 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 RPL7P1-201ENST00000468161 747 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 RPL7P9-201ENST00000468715 747 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 CEACAMP10-202ENST00000495431 496 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC009643.1-201ENST00000532030 391 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC068446.3-201ENST00000555285 382 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC010620.1-201ENST00000601088 1102 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC010857.1-201ENST00000606398 594 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC243773.3-201ENST00000613270 256 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AL133243.1-201ENST00000614487 366 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC231657.1-201ENST00000624313 397 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AC011944.2-201ENST00000624440 683 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 AL445523.1-201ENST00000451184 1362 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 MTCO1P14-201ENST00000441695 1559 ntBASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHMP4CQ96CF2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AC011978.2-201ENST00000569835 2054 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AL513185.3-201ENST00000433335 1300 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 RNA5SP22-201ENST00000365393 109 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 RPS3AP23-201ENST00000401762 784 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 RAD23BP1-201ENST00000421404 1227 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 CHIAP3-201ENST00000423668 1133 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AL162591.2-201ENST00000449634 317 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 MTCO3P16-201ENST00000454456 754 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 RPL30P6-201ENST00000475925 342 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AC108078.3-201ENST00000502633 489 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 STMN1P2-201ENST00000508435 439 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 XKRY-201ENST00000510392 1100 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AC104057.1-201ENST00000515547 497 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AC007954.1-201ENST00000554198 494 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AC135628.1-201ENST00000568867 534 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 PIGPP4-201ENST00000584447 307 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AC124312.4-201ENST00000605533 310 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 AL731566.2-201ENST00000618971 317 ntBASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHMP4CQ96CF2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 LINC00622-201ENST00000562811 1570 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 AL592148.3-201ENST00000608771 2646 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms