Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AC017071.1-201ENST00000564407 2204 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AC074367.1-201ENST00000438685 1125 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 HSPE1P6-201ENST00000479457 291 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 SNORA70.19-201ENST00000516717 90 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AGGF1P8-201ENST00000562979 1000 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AL035413.2-201ENST00000604801 525 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 SNORA67.4-201ENST00000384688 142 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 MIR512-1-201ENST00000384913 84 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AL513174.1-201ENST00000423182 629 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 OR4H12P-201ENST00000556269 907 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 RWDD4P2-201ENST00000426392 563 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 RWDD4P1-201ENST00000488019 565 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 RPS29P21-201ENST00000496272 170 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 PCBP2P3-201ENST00000509726 843 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 CYCSP41-201ENST00000616920 296 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 MIR7843-201ENST00000622274 79 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AC067852.7-201ENST00000623270 535 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AL672167.1-206ENST00000356293 943 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 SNORA71.1-201ENST00000364523 117 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 YWHAEP4-201ENST00000505390 198 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 uc_338.1-201ENST00000612113 180 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AC022509.4-201ENST00000621404 572 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AC241585.2-209ENST00000638217 143 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 RNU6-304P-201ENST00000364855 107 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AL391417.1-201ENST00000404100 426 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 RNA5SP31-201ENST00000411144 127 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AL592148.1-201ENST00000413568 445 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 DUTP6-201ENST00000425573 462 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AC021146.5-201ENST00000503544 545 ntBASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
ALMS1Q8TCU4 MIR22-201ENST00000362190 85 ntBASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 Y_RNA.238-201ENST00000364441 102 ntBASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 CST9LP2-201ENST00000437612 320 ntBASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 AC068305.1-201ENST00000497406 726 ntBASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 AC017037.2-201ENST00000513850 890 ntBASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 AP001207.2-201ENST00000519490 539 ntBASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 AC027176.1-201ENST00000560204 514 ntBASIC2.09□□□□□ -2.07
ALMS1Q8TCU4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms