Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 TXNP1-201ENST00000441872 371 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 RNF148-202ENST00000447240 839 ntTSL 2 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 snoU13.26-201ENST00000459452 105 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC021678.1-201ENST00000505195 936 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AP000873.5-201ENST00000533906 236 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 EIF1P6-201ENST00000600054 334 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AP000255.1-201ENST00000610276 676 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC073069.1-201ENST00000428657 441 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC006028.1-201ENST00000438379 402 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC074367.1-201ENST00000438685 1125 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 MIR1183-201ENST00000408856 89 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 NAP1L1P2-201ENST00000414182 1089 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 RPS12P23-201ENST00000419579 400 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 RPS26P47-201ENST00000427219 348 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL365396.1-201ENST00000430854 671 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL139132.1-201ENST00000431587 344 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL450263.2-201ENST00000439400 589 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 RNA5SP154-201ENST00000516193 111 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC009313.2-201ENST00000417893 1941 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 OR5J1P-201ENST00000313544 939 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 Y_RNA.118-201ENST00000363300 101 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 RNA5-8SP4-201ENST00000365096 150 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 MRPL50P2-201ENST00000416821 482 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 NPM1P11-201ENST00000417106 855 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 TPTE2P3-201ENST00000441562 1189 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC010307.1-201ENST00000467206 836 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 SCARNA20.6-201ENST00000517251 106 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC106785.3-201ENST00000564064 847 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC090971.4-201ENST00000560291 1800 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 NR1H5P-201ENST00000452683 1377 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL136360.1-201ENST00000503377 1900 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 MTND5P23-201ENST00000430812 1655 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL138885.1-201ENST00000405921 675 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 HMGN2P7-201ENST00000456186 273 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 RPS3AP50-201ENST00000487064 803 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC112198.1-201ENST00000505369 1220 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC090819.1-201ENST00000523800 1111 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL158062.1-201ENST00000619632 745 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC019155.1-201ENST00000382242 574 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 OFD1P11Y-201ENST00000418213 1177 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 SETP12-201ENST00000514068 805 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC091515.1-201ENST00000548110 679 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AP003485.2-201ENST00000623636 610 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 SNORA7.4-201ENST00000384249 137 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL445529.1-201ENST00000398713 389 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 RPL31P12-201ENST00000422587 358 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 RPF2P1-201ENST00000424137 906 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 IPMKP1-201ENST00000425988 855 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 BX679664.1-201ENST00000434429 253 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 EXTL2P1-201ENST00000446218 416 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 RPL7P12-201ENST00000446719 750 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC068657.1-201ENST00000520807 306 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 6.7 ms