Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.4□□□□□ -1.7
ZNF548Q8NEK5 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.4□□□□□ -1.7
ZNF548Q8NEK5 CPHL1P-201ENST00000461341 3407 ntBASIC4.4□□□□□ -1.7
ZNF548Q8NEK5 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ZNF548Q8NEK5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.4□□□□□ -1.7
ZNF548Q8NEK5 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ZNF548Q8NEK5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ZNF548Q8NEK5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ZNF548Q8NEK5 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ZNF548Q8NEK5 OR5P1P-201ENST00000299512 925 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 RNA5SP151-201ENST00000365632 117 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 SNORA70C-201ENST00000384538 135 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 MIR217-201ENST00000384817 110 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 RN7SKP167-201ENST00000411047 285 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 FCF1P9-201ENST00000412546 282 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC007899.1-201ENST00000412776 775 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 RAD23BP1-201ENST00000421404 1227 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 MTND4LP11-201ENST00000422184 280 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 RPS27AP12-201ENST00000429552 465 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC241584.1-201ENST00000438469 1241 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 MTND1P30-201ENST00000441241 901 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 RPL23AP43-201ENST00000446445 471 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 NUTF2P3-201ENST00000448540 384 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 KATNBL1P6-201ENST00000453433 915 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 SUMO2P2-201ENST00000456482 255 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC104687.1-201ENST00000485829 412 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 MTCO1P35-201ENST00000515270 228 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 RN7SKP31-201ENST00000516354 278 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 NRON-201ENST00000517270 370 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 MRPL49P2-201ENST00000521066 465 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 SMARCE1P4-201ENST00000523647 241 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 OR5G4P-201ENST00000525251 760 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 HMGB2P1-201ENST00000591146 634 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AL391497.1-201ENST00000608671 547 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC010678.1-201ENST00000614118 713 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 MIR7844-201ENST00000616161 122 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AL445567.2-201ENST00000618935 498 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AP001005.3-201ENST00000622049 129 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 OR2L1P-202ENST00000641567 1023 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC099063.3-201ENST00000642066 185 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 DCAF13P3-201ENST00000561147 1334 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 LINC00622-201ENST00000562811 1570 ntBASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ZNF548Q8NEK5 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 RNA5SP515-201ENST00000364570 118 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 Y_RNA.516-201ENST00000384541 124 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 RNU6-253P-201ENST00000384730 105 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AL512430.2-201ENST00000406786 339 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 PIGPP2-201ENST00000411569 458 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 USP9YP33-201ENST00000412220 421 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 RPL23AP26-201ENST00000412728 464 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 SNRPFP1-201ENST00000414761 252 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 CYCSP10-201ENST00000417973 294 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 Z93242.1-201ENST00000427102 353 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 SEPT7P5-201ENST00000434048 306 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC093155.1-201ENST00000440164 826 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 CDC27P1-201ENST00000445384 715 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 MTND4P18-201ENST00000447010 465 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 COX6CP18-201ENST00000448769 222 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC053481.1-201ENST00000467217 306 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 RPL23AP12-201ENST00000467573 473 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms