Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 RN7SKP224-201ENST00000364140 325 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 SNORA70C-201ENST00000384538 135 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AL512430.2-201ENST00000406786 339 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 SNORA11F-201ENST00000408237 128 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 RNU2-21P-201ENST00000410368 188 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 TPT1P2-201ENST00000413105 503 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 NUP35P2-201ENST00000416748 943 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AL593851.1-201ENST00000426171 157 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 TXNL1P1-201ENST00000429528 554 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 RPL23AP25-201ENST00000430973 463 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 RPS25P9-201ENST00000435591 252 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 UBE2D3P1-201ENST00000436669 444 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 MTND2P19-201ENST00000449129 1012 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 SLC31A1P1-201ENST00000451221 567 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 MTCO3P11-201ENST00000455103 774 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 MTCO3P2-201ENST00000457365 171 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC010469.1-201ENST00000463864 576 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 RPL5P30-201ENST00000465511 891 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC012158.1-204ENST00000483430 465 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC090071.1-201ENST00000507713 644 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC108475.1-201ENST00000507880 950 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 ATP1B1P1-201ENST00000509767 915 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 RN7SKP21-201ENST00000516503 220 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 RN7SKP82-201ENST00000516786 223 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 OR4A12P-201ENST00000530847 918 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC125611.1-201ENST00000549563 229 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC107982.3-201ENST00000584957 985 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AL109653.1-201ENST00000603091 248 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC112220.3-201ENST00000605502 502 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AP001521.1-201ENST00000609150 300 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC245297.2-201ENST00000610119 565 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 LINC00901.1-201ENST00000617252 152 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AL136981.2-201ENST00000617319 734 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 MIR7154-201ENST00000620673 73 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AC091905.2-201ENST00000623143 306 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AL158163.1-201ENST00000603915 1649 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC011978.2-201ENST00000569835 2054 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AL121657.1-201ENST00000327215 531 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 MIR383-201ENST00000362257 73 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 RNU6-1200P-201ENST00000384162 107 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 RNU6-1122P-201ENST00000384449 107 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 ZNF603P-201ENST00000405613 487 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 MIR1284-201ENST00000408337 120 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AL133384.1-201ENST00000412744 351 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 RPL23AP38-201ENST00000423801 469 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AL022400.1-201ENST00000423946 935 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 RPS27AP12-201ENST00000429552 465 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC114495.1-201ENST00000441274 436 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 HMGB3P9-201ENST00000441799 583 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 HMGB3P21-201ENST00000452483 547 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 RN7SL812P-201ENST00000493791 279 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC005726.1-201ENST00000494679 427 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC147055.4-201ENST00000504399 745 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms