Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNU4-51P-201ENST00000364206 140 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 SNORD65.1-201ENST00000390889 71 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AL445189.1-201ENST00000405722 338 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 RPL23AP47-201ENST00000408017 460 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 MIR1179-201ENST00000408703 91 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 RNU2-28P-201ENST00000410457 189 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 KRR1P1-201ENST00000419430 803 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 CDC27P1-201ENST00000445384 715 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AC239367.2-201ENST00000447309 705 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 PNPLA4P1-201ENST00000458328 305 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AC104164.3-201ENST00000467363 1258 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AL136126.1-201ENST00000473603 402 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 RPS29P19-201ENST00000479709 171 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 RPL21P131-201ENST00000497298 483 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 GTF2IP8-201ENST00000560687 584 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AC007599.1-201ENST00000568688 1174 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 MIR1254-2-201ENST00000579553 63 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 BNIP3P39-201ENST00000601077 554 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AL159169.3-201ENST00000608871 561 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AC010975.3-201ENST00000618727 978 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 RMST_9.1-201ENST00000619945 193 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AL391262.2-201ENST00000622466 494 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AP005901.5-201ENST00000545779 1796 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 OR8G2P-201ENST00000412796 908 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC092647.1-201ENST00000420654 287 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 OFD1P18Y-201ENST00000420889 959 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 GTF2IP23-201ENST00000423746 351 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 SDCBPP2-201ENST00000424643 885 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC004022.1-201ENST00000447766 1066 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 NCOR1P1-202ENST00000486162 291 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 RPL5P23-201ENST00000496040 868 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 MTCYBP37-201ENST00000510642 1133 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC105233.3-201ENST00000531125 744 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AP003385.6-201ENST00000531603 374 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC090502.2-201ENST00000549267 280 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC008127.2-201ENST00000549925 1075 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 SULT1C2P1-202ENST00000562418 459 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC106785.1-201ENST00000565935 262 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 MIR3912-201ENST00000577566 105 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC090616.5-202ENST00000582111 297 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC068790.5-201ENST00000602741 355 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AL365400.2-201ENST00000605604 902 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 RNU4-89P-201ENST00000607443 133 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC104763.3-201ENST00000613765 618 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC103858.2-201ENST00000621471 543 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 AC130650.2-201ENST00000618736 2403 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 ZNF37BP-203ENST00000452306 1352 ntBASIC4.25□□□□□ -1.73
PRPF39Q86UA1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PRPF39Q86UA1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms