Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RPS4XP22-201ENST00000480755 780 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AC018797.3-201ENST00000513388 1241 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 SNORA70.19-201ENST00000516717 90 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 SETP1-201ENST00000556014 845 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AC099489.2-201ENST00000574976 260 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AC025811.1-201ENST00000604312 472 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AC009948.4-201ENST00000604692 675 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 SNORA9.2-201ENST00000365361 133 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AP000926.3-201ENST00000497201 299 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 TCP11X3P-202ENST00000514289 1254 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 DPRXP4-201ENST00000578053 568 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AC010680.4-201ENST00000605334 543 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 ELF2P3-201ENST00000445099 1506 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AL161781.1-201ENST00000354277 403 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 DUTP6-201ENST00000425573 462 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 RN7SL93P-201ENST00000463035 293 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 RPS27AP9-201ENST00000477681 438 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 RPL31P13-201ENST00000484151 370 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AC015917.1-201ENST00000579654 510 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AL158827.2-201ENST00000602494 330 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 AL691447.3-201ENST00000635020 330 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 PRDX3P4-201ENST00000470828 747 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 TRBV8-2-201ENST00000475637 270 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 GAPDHP39-201ENST00000481866 979 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 AC108210.2-201ENST00000503681 201 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 AC103710.3-201ENST00000608157 948 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 AC019072.1-201ENST00000604535 1551 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 HMGN2P8-201ENST00000391458 268 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 RPS26P47-201ENST00000427219 348 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 AC021205.1-201ENST00000468797 348 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 RPS26P3-201ENST00000470205 348 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 AC004057.1-201ENST00000485827 348 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 RN7SKP283-201ENST00000517197 270 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 AC107934.2-201ENST00000518653 310 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 ATP5F1P7-201ENST00000567330 760 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 AL365400.2-201ENST00000605604 902 ntBASIC2.03□□□□□ -2.08
CSMD3Q7Z407 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.03□□□□□ -2.08
CSMD3Q7Z407 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
CSMD3Q7Z407 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.03□□□□□ -2.09
CSMD3Q7Z407 ACTG1P13-201ENST00000486987 1043 ntBASIC2.03□□□□□ -2.09
CSMD3Q7Z407 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.03□□□□□ -2.09
CSMD3Q7Z407 AL034351.1-201ENST00000605288 668 ntBASIC2.03□□□□□ -2.09
CSMD3Q7Z407 AL354950.1-201ENST00000614150 568 ntBASIC2.03□□□□□ -2.09
CSMD3Q7Z407 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 MIR7-2-201ENST00000384970 110 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 RPS3AP26-201ENST00000398259 784 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 SNRPGP5-201ENST00000456003 220 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AC010468.1-201ENST00000461022 817 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AC010307.1-201ENST00000467206 836 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AC078785.3-201ENST00000476607 425 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AC114967.1-201ENST00000504890 259 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AC016727.1-205ENST00000605437 569 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 OR1S2-201ENST00000302592 978 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 RNU2-52P-201ENST00000410680 190 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms