Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 NIPA2P5-201ENST00000452282 464 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AC126121.1-201ENST00000482313 553 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AC078817.1-201ENST00000492623 435 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AC046144.1-201ENST00000478559 1853 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AC011816.1-201ENST00000441346 546 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 RPL7L1P1-201ENST00000448259 785 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 PRDX3P4-201ENST00000470828 747 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 MIR4425-201ENST00000580572 84 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AL356274.1-201ENST00000617064 410 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 MRPS18BP2-201ENST00000434310 759 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 RPS29P6-201ENST00000438196 145 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 Z99127.3-201ENST00000448158 395 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 RN7SKP223-201ENST00000410582 62 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC009263.1-201ENST00000441193 1239 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 RPL31P13-201ENST00000484151 370 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 FAM172BP-201ENST00000487497 1089 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC244205.2-202ENST00000635781 342 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 ARL5AP4-201ENST00000430731 512 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 RPS24P13-201ENST00000442520 397 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 VWA8P1-201ENST00000510889 176 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC243972.3-201ENST00000539655 198 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC093831.2-201ENST00000624393 3427 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AL121877.1-201ENST00000453704 622 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 RFPL4AP3-201ENST00000515267 345 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC019080.5-201ENST00000624891 757 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC000403.1-201ENST00000613696 3585 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 MIR184-201ENST00000384962 84 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 RPS4XP7-201ENST00000406274 780 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 MIR1289-2-201ENST00000408360 111 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 NECAP1P2-201ENST00000455668 727 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC108078.3-201ENST00000502633 489 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC068657.1-201ENST00000520807 306 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 OR10D4P-201ENST00000525892 951 ntBASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13DQ5THJ4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 MIR504-201ENST00000385065 83 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms