Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.14□□□□□ -1.75
LTBQ06643 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.14□□□□□ -1.75
LTBQ06643 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.14□□□□□ -1.75
LTBQ06643 RN7SL176P-201ENST00000580352 264 ntBASIC4.14□□□□□ -1.75
LTBQ06643 AC087683.1-201ENST00000591187 441 ntBASIC4.14□□□□□ -1.75
LTBQ06643 ZYXP1-201ENST00000617638 118 ntBASIC4.14□□□□□ -1.75
LTBQ06643 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.14□□□□□ -1.75
LTBQ06643 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LTBQ06643 U3.53-201ENST00000628922 216 ntBASIC4.14□□□□□ -1.75
LTBQ06643 AC127502.3-201ENST00000636170 1206 ntBASIC4.14□□□□□ -1.75
LTBQ06643 AC068137.3-201ENST00000639191 341 ntBASIC4.14□□□□□ -1.75
LTBQ06643 AC073869.6-201ENST00000640656 341 ntBASIC4.14□□□□□ -1.75
LTBQ06643 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LTBQ06643 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
LTBQ06643 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.14□□□□□ -1.75
LTBQ06643 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.13□□□□□ -1.75
LTBQ06643 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.13□□□□□ -1.75
LTBQ06643 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.13□□□□□ -1.75
LTBQ06643 AC009951.1-201ENST00000623674 2614 ntBASIC4.13□□□□□ -1.75
LTBQ06643 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LTBQ06643 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
LTBQ06643 AC093311.1-201ENST00000506586 2021 ntBASIC4.13□□□□□ -1.75
LTBQ06643 HMGB1P5-201ENST00000255320 642 ntBASIC4.13□□□□□ -1.75
LTBQ06643 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
LTBQ06643 AL121657.1-201ENST00000327215 531 ntBASIC4.13□□□□□ -1.75
LTBQ06643 RNU6-525P-201ENST00000363685 104 ntBASIC4.13□□□□□ -1.75
LTBQ06643 SNORA62.2-201ENST00000364672 152 ntBASIC4.13□□□□□ -1.75
LTBQ06643 SNORA70.4-201ENST00000365509 134 ntBASIC4.13□□□□□ -1.75
LTBQ06643 MIR217-201ENST00000384817 110 ntBASIC4.13□□□□□ -1.75
LTBQ06643 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LTBQ06643 ATP5F1P4-201ENST00000397288 746 ntBASIC4.13□□□□□ -1.75
LTBQ06643 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.13□□□□□ -1.75
LTBQ06643 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.13□□□□□ -1.75
LTBQ06643 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.13□□□□□ -1.75
LTBQ06643 RN7SKP222-201ENST00000410651 315 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.13□□□□□ -1.75
LTBQ06643 TPT1P2-201ENST00000413105 503 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.13□□□□□ -1.75
LTBQ06643 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.13□□□□□ -1.75
LTBQ06643 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 MTND4LP11-201ENST00000422184 280 ntBASIC4.13□□□□□ -1.75
LTBQ06643 PDSS1P1-201ENST00000422953 1114 ntBASIC4.13□□□□□ -1.75
LTBQ06643 CYCSP46-201ENST00000423569 204 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 Z93242.1-201ENST00000427102 353 ntBASIC4.13□□□□□ -1.75
LTBQ06643 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.13□□□□□ -1.75
LTBQ06643 MTCO3P21-201ENST00000430791 643 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.13□□□□□ -1.75
LTBQ06643 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 AC092641.1-201ENST00000440229 772 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.13□□□□□ -1.75
LTBQ06643 EEF1A1P1-201ENST00000447052 739 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AC073587.1-201ENST00000447093 876 ntBASIC4.13□□□□□ -1.75
LTBQ06643 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 BX248409.1-201ENST00000455497 255 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 RN7SL809P-201ENST00000482040 297 ntBASIC4.13□□□□□ -1.75
LTBQ06643 NIP7P2-201ENST00000485801 544 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AP002812.1-201ENST00000495378 474 ntBASIC4.13□□□□□ -1.75
LTBQ06643 NRON-201ENST00000517270 370 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 MTND4LP26-201ENST00000518144 282 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 AL390334.1-201ENST00000556395 450 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.13□□□□□ -1.75
LTBQ06643 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 MTND1P15-201ENST00000579262 949 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 AC008507.1-201ENST00000587506 734 ntBASIC4.13□□□□□ -1.75
LTBQ06643 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.13□□□□□ -1.75
LTBQ06643 BNIP3P11-201ENST00000603878 563 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AP002360.4-201ENST00000606980 481 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AC091979.2-201ENST00000607514 214 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AC108747.1-201ENST00000609508 535 ntBASIC4.13□□□□□ -1.75
LTBQ06643 Z99129.1-201ENST00000612510 255 ntBASIC4.13□□□□□ -1.75
LTBQ06643 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LTBQ06643 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.13□□□□□ -1.75
LTBQ06643 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.13□□□□□ -1.75
LTBQ06643 AC055839.1-201ENST00000634467 498 ntBASIC4.13□□□□□ -1.75
LTBQ06643 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.13□□□□□ -1.75
LTBQ06643 CASC19-204ENST00000641001 2055 ntBASIC4.13□□□□□ -1.75
LTBQ06643 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LTBQ06643 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LTBQ06643 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.13□□□□□ -1.75
LTBQ06643 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LTBQ06643 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.13□□□□□ -1.75
LTBQ06643 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LTBQ06643 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.13□□□□□ -1.75
LTBQ06643 MAPK10-286ENST00000641208 8747 ntBASIC4.13□□□□□ -1.75
LTBQ06643 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.13□□□□□ -1.75
LTBQ06643 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
LTBQ06643 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LTBQ06643 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.12□□□□□ -1.75
LTBQ06643 AL353743.4-201ENST00000422653 1547 ntBASIC4.12□□□□□ -1.75
LTBQ06643 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LTBQ06643 SNORA4.1-201ENST00000364263 144 ntBASIC4.12□□□□□ -1.75
LTBQ06643 SNORA70F-201ENST00000384142 135 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms