Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 HMGB3P15-201ENST00000507326 574 ntBASIC3.8□□□□□ -1.8
GABPB1Q06547 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.8□□□□□ -1.8
GABPB1Q06547 AC119751.1-201ENST00000513357 765 ntBASIC3.8□□□□□ -1.8
GABPB1Q06547 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.8□□□□□ -1.8
GABPB1Q06547 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
GABPB1Q06547 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.8□□□□□ -1.8
GABPB1Q06547 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
GABPB1Q06547 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.8□□□□□ -1.8
GABPB1Q06547 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.8□□□□□ -1.8
GABPB1Q06547 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.8□□□□□ -1.8
GABPB1Q06547 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.8□□□□□ -1.8
GABPB1Q06547 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.8□□□□□ -1.8
GABPB1Q06547 MIR4789-201ENST00000577469 82 ntBASIC3.8□□□□□ -1.8
GABPB1Q06547 MIR4700-201ENST00000578311 74 ntBASIC3.8□□□□□ -1.8
GABPB1Q06547 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
GABPB1Q06547 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.8□□□□□ -1.8
GABPB1Q06547 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.8□□□□□ -1.8
GABPB1Q06547 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.8□□□□□ -1.8
GABPB1Q06547 AC113403.1-201ENST00000604910 193 ntBASIC3.8□□□□□ -1.8
GABPB1Q06547 AC120053.1-201ENST00000607706 736 ntBASIC3.8□□□□□ -1.8
GABPB1Q06547 MIR6820-201ENST00000611508 62 ntBASIC3.8□□□□□ -1.8
GABPB1Q06547 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.8□□□□□ -1.8
GABPB1Q06547 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.8□□□□□ -1.8
GABPB1Q06547 AC087385.3-201ENST00000620477 187 ntBASIC3.8□□□□□ -1.8
GABPB1Q06547 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.8□□□□□ -1.8
GABPB1Q06547 AC092184.1-201ENST00000625042 715 ntBASIC3.8□□□□□ -1.8
GABPB1Q06547 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
GABPB1Q06547 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GABPB1Q06547 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.8□□□□□ -1.8
GABPB1Q06547 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GABPB1Q06547 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
GABPB1Q06547 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GABPB1Q06547 MTND5P7-201ENST00000413558 1798 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.79□□□□□ -1.8
GABPB1Q06547 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.79□□□□□ -1.8
GABPB1Q06547 OR4A15-201ENST00000314706 1035 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GABPB1Q06547 RNU6-600P-201ENST00000362524 99 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 RNU6-444P-201ENST00000383988 108 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 U6.112-201ENST00000384129 70 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 RNA5SP87-201ENST00000384155 118 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GABPB1Q06547 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.79□□□□□ -1.8
GABPB1Q06547 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GABPB1Q06547 AL445189.1-201ENST00000405722 338 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AP000567.1-201ENST00000406413 156 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 MIR1250-201ENST00000408098 113 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 OR51A3P-201ENST00000413596 924 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.79□□□□□ -1.8
GABPB1Q06547 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GABPB1Q06547 AC244505.4-201ENST00000434905 287 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.79□□□□□ -1.8
GABPB1Q06547 SSXP5-201ENST00000443473 287 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.79□□□□□ -1.8
GABPB1Q06547 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.79□□□□□ -1.8
GABPB1Q06547 HMGN3P1-201ENST00000453847 193 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AC099563.1-201ENST00000456086 418 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 PRDX3P4-201ENST00000470828 747 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.79□□□□□ -1.8
GABPB1Q06547 AC093278.1-201ENST00000494700 600 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AC108078.3-201ENST00000502633 489 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.79□□□□□ -1.8
GABPB1Q06547 RN7SKP244-201ENST00000516513 307 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 CDH12P4-201ENST00000517835 295 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 CDH12P3-201ENST00000517935 295 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 CDH12P1-201ENST00000518435 295 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AC087369.1-201ENST00000520775 996 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.79□□□□□ -1.8
GABPB1Q06547 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.79□□□□□ -1.8
GABPB1Q06547 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GABPB1Q06547 OR4R3P-201ENST00000525084 838 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GABPB1Q06547 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.79□□□□□ -1.8
GABPB1Q06547 OR8K4P-201ENST00000534608 872 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.79□□□□□ -1.8
GABPB1Q06547 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GABPB1Q06547 AC009117.1-201ENST00000563948 554 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.79□□□□□ -1.8
GABPB1Q06547 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
GABPB1Q06547 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.79□□□□□ -1.8
GABPB1Q06547 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.79□□□□□ -1.8
GABPB1Q06547 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.79□□□□□ -1.8
GABPB1Q06547 MTATP6P2-201ENST00000603319 678 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AC112230.1-201ENST00000604342 547 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AL009028.1-201ENST00000604895 802 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AL158211.2-201ENST00000607282 395 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.79□□□□□ -1.8
GABPB1Q06547 AC078880.5-201ENST00000617845 421 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 AC068880.4-201ENST00000623082 495 ntBASIC3.79□□□□□ -1.8
GABPB1Q06547 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.79□□□□□ -1.8
GABPB1Q06547 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.79□□□□□ -1.8
GABPB1Q06547 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GABPB1Q06547 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
GABPB1Q06547 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.78□□□□□ -1.8
GABPB1Q06547 AC118273.1-201ENST00000525324 3006 ntBASIC3.78□□□□□ -1.8
GABPB1Q06547 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.78□□□□□ -1.8
GABPB1Q06547 MIR199A2-201ENST00000385289 110 ntBASIC3.78□□□□□ -1.8
GABPB1Q06547 RNA5SP397-201ENST00000391323 118 ntBASIC3.78□□□□□ -1.8
GABPB1Q06547 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.78□□□□□ -1.8
GABPB1Q06547 UBE2V1P9-201ENST00000414760 368 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms