Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.94□□□□□ -2.1
RPL39P62891 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RPL39P62891 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
RPL39P62891 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RPL39P62891 DEFA7P-201ENST00000382676 285 ntBASIC1.93□□□□□ -2.1
RPL39P62891 SNORD21-201ENST00000383953 95 ntBASIC1.93□□□□□ -2.1
RPL39P62891 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RPL39P62891 MTND4P13-201ENST00000402078 1023 ntBASIC1.93□□□□□ -2.1
RPL39P62891 GSTA8P-201ENST00000404253 637 ntBASIC1.93□□□□□ -2.1
RPL39P62891 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC1.93□□□□□ -2.1
RPL39P62891 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC1.93□□□□□ -2.1
RPL39P62891 DPPA2P1-201ENST00000428060 556 ntBASIC1.93□□□□□ -2.1
RPL39P62891 AC022018.1-201ENST00000430685 241 ntBASIC1.93□□□□□ -2.1
RPL39P62891 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC1.93□□□□□ -2.1
RPL39P62891 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC1.93□□□□□ -2.1
RPL39P62891 CACYBPP1-201ENST00000438592 684 ntBASIC1.93□□□□□ -2.1
RPL39P62891 RPL21P2-201ENST00000440049 481 ntBASIC1.93□□□□□ -2.1
RPL39P62891 H2AFZP6-201ENST00000444403 394 ntBASIC1.93□□□□□ -2.1
RPL39P62891 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RPL39P62891 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.93□□□□□ -2.1
RPL39P62891 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC1.93□□□□□ -2.1
RPL39P62891 PDSS1P2-201ENST00000449397 678 ntBASIC1.93□□□□□ -2.1
RPL39P62891 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.93□□□□□ -2.1
RPL39P62891 HMGB1P25-201ENST00000468402 607 ntBASIC1.93□□□□□ -2.1
RPL39P62891 AC016687.1-201ENST00000482574 353 ntBASIC1.93□□□□□ -2.1
RPL39P62891 AC006499.5-201ENST00000505037 514 ntBASIC1.93□□□□□ -2.1
RPL39P62891 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RPL39P62891 PRELID3BP5-201ENST00000508612 460 ntBASIC1.93□□□□□ -2.1
RPL39P62891 AC026412.2-201ENST00000512270 1075 ntBASIC1.93□□□□□ -2.1
RPL39P62891 SCGB1D5P-201ENST00000515134 247 ntBASIC1.93□□□□□ -2.1
RPL39P62891 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC1.93□□□□□ -2.1
RPL39P62891 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.93□□□□□ -2.1
RPL39P62891 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC1.93□□□□□ -2.1
RPL39P62891 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.93□□□□□ -2.1
RPL39P62891 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.93□□□□□ -2.1
RPL39P62891 AC091488.1-201ENST00000604239 660 ntBASIC1.93□□□□□ -2.1
RPL39P62891 MIR3651-201ENST00000630427 90 ntBASIC1.93□□□□□ -2.1
RPL39P62891 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RPL39P62891 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPL39P62891 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RPL39P62891 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPL39P62891 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.92□□□□□ -2.1
RPL39P62891 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPL39P62891 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.92□□□□□ -2.1
RPL39P62891 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RPL39P62891 SNORA25.6-201ENST00000364121 118 ntBASIC1.92□□□□□ -2.1
RPL39P62891 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RPL39P62891 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPL39P62891 U3.19-201ENST00000390893 196 ntBASIC1.92□□□□□ -2.1
RPL39P62891 RNA5SP210-201ENST00000391034 120 ntBASIC1.92□□□□□ -2.1
RPL39P62891 AC008065.1-201ENST00000428525 348 ntBASIC1.92□□□□□ -2.1
RPL39P62891 AC005326.1-201ENST00000429197 123 ntBASIC1.92□□□□□ -2.1
RPL39P62891 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC1.92□□□□□ -2.1
RPL39P62891 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.92□□□□□ -2.1
RPL39P62891 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC1.92□□□□□ -2.1
RPL39P62891 RSL24D1P2-201ENST00000445584 366 ntBASIC1.92□□□□□ -2.1
RPL39P62891 RN7SL809P-201ENST00000482040 297 ntBASIC1.92□□□□□ -2.1
RPL39P62891 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC1.92□□□□□ -2.1
RPL39P62891 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RPL39P62891 SNORA74D-201ENST00000516404 141 ntBASIC1.92□□□□□ -2.1
RPL39P62891 OR7K1P-201ENST00000546439 926 ntBASIC1.92□□□□□ -2.1
RPL39P62891 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.92□□□□□ -2.1
RPL39P62891 AC068446.3-201ENST00000555285 382 ntBASIC1.92□□□□□ -2.1
RPL39P62891 AC034268.2-201ENST00000571784 482 ntBASIC1.92□□□□□ -2.1
RPL39P62891 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC1.92□□□□□ -2.1
RPL39P62891 RNU6-84P-201ENST00000607737 102 ntBASIC1.92□□□□□ -2.1
RPL39P62891 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.92□□□□□ -2.1
RPL39P62891 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
RPL39P62891 MIR7112-201ENST00000616126 65 ntBASIC1.92□□□□□ -2.1
RPL39P62891 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RPL39P62891 API5P2-201ENST00000397055 1498 ntBASIC1.92□□□□□ -2.1
RPL39P62891 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC1.92□□□□□ -2.1
RPL39P62891 SEPT7P7-201ENST00000420492 1301 ntBASIC1.91□□□□□ -2.1
RPL39P62891 AC109315.1-201ENST00000584143 1347 ntBASIC1.91□□□□□ -2.1
RPL39P62891 AL161912.2-201ENST00000565707 3007 ntBASIC1.91□□□□□ -2.1
RPL39P62891 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.91□□□□□ -2.1
RPL39P62891 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.91□□□□□ -2.1
RPL39P62891 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC1.91□□□□□ -2.1
RPL39P62891 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RPL39P62891 SNORA63.1-201ENST00000362493 131 ntBASIC1.91□□□□□ -2.1
RPL39P62891 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.91□□□□□ -2.1
RPL39P62891 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.91□□□□□ -2.1
RPL39P62891 AC112653.1-201ENST00000443851 386 ntBASIC1.91□□□□□ -2.1
RPL39P62891 PTGES3P5-201ENST00000455109 434 ntBASIC1.91□□□□□ -2.1
RPL39P62891 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC1.91□□□□□ -2.1
RPL39P62891 AC006445.1-201ENST00000491925 405 ntBASIC1.91□□□□□ -2.1
RPL39P62891 AL133372.1-201ENST00000493565 745 ntBASIC1.91□□□□□ -2.1
RPL39P62891 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.91□□□□□ -2.1
RPL39P62891 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC1.91□□□□□ -2.1
RPL39P62891 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.91□□□□□ -2.1
RPL39P62891 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC1.91□□□□□ -2.1
RPL39P62891 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.91□□□□□ -2.1
RPL39P62891 MTCO1P49-201ENST00000523429 802 ntBASIC1.91□□□□□ -2.1
RPL39P62891 HIGD1AP5-201ENST00000529959 259 ntBASIC1.91□□□□□ -2.1
RPL39P62891 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPL39P62891 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
RPL39P62891 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC1.91□□□□□ -2.1
RPL39P62891 BNIP3P5-201ENST00000562290 498 ntBASIC1.91□□□□□ -2.1
RPL39P62891 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC1.91□□□□□ -2.1
RPL39P62891 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms