Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CMC4P56277 RNA5SP167-201ENST00000365461 116 ntBASIC2.7□□□□□ -1.98
CMC4P56277 MIR218-2-201ENST00000385006 110 ntBASIC2.7□□□□□ -1.98
CMC4P56277 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.7□□□□□ -1.98
CMC4P56277 U3.39-201ENST00000408569 239 ntBASIC2.7□□□□□ -1.98
CMC4P56277 RNU6-77P-201ENST00000410554 91 ntBASIC2.7□□□□□ -1.98
CMC4P56277 AC069218.2-201ENST00000411665 344 ntBASIC2.7□□□□□ -1.98
CMC4P56277 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.7□□□□□ -1.98
CMC4P56277 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.7□□□□□ -1.98
CMC4P56277 OSTCP5-201ENST00000425293 453 ntBASIC2.7□□□□□ -1.98
CMC4P56277 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.7□□□□□ -1.98
CMC4P56277 OR51AB1P-201ENST00000429046 620 ntBASIC2.7□□□□□ -1.98
CMC4P56277 CKS1BP5-201ENST00000434172 273 ntBASIC2.7□□□□□ -1.98
CMC4P56277 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.7□□□□□ -1.98
CMC4P56277 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.7□□□□□ -1.98
CMC4P56277 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.7□□□□□ -1.98
CMC4P56277 CDC27P1-201ENST00000445384 715 ntBASIC2.7□□□□□ -1.98
CMC4P56277 GTF2IP12-201ENST00000456547 356 ntBASIC2.7□□□□□ -1.98
CMC4P56277 UBDP1-202ENST00000457888 382 ntBASIC2.7□□□□□ -1.98
CMC4P56277 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.7□□□□□ -1.98
CMC4P56277 RPL23AP67-201ENST00000465341 474 ntBASIC2.7□□□□□ -1.98
CMC4P56277 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.7□□□□□ -1.98
CMC4P56277 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.7□□□□□ -1.98
CMC4P56277 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.7□□□□□ -1.98
CMC4P56277 MTCO1P30-201ENST00000515244 580 ntBASIC2.7□□□□□ -1.98
CMC4P56277 RNA5SP143-201ENST00000516936 115 ntBASIC2.7□□□□□ -1.98
CMC4P56277 RNU1-45P-201ENST00000517191 141 ntBASIC2.7□□□□□ -1.98
CMC4P56277 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.7□□□□□ -1.98
CMC4P56277 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CMC4P56277 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.7□□□□□ -1.98
CMC4P56277 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.7□□□□□ -1.98
CMC4P56277 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC2.7□□□□□ -1.98
CMC4P56277 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.7□□□□□ -1.98
CMC4P56277 AC090616.5-202ENST00000582111 297 ntBASIC2.7□□□□□ -1.98
CMC4P56277 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.7□□□□□ -1.98
CMC4P56277 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.7□□□□□ -1.98
CMC4P56277 AC008739.3-201ENST00000603262 127 ntBASIC2.7□□□□□ -1.98
CMC4P56277 AC007566.2-201ENST00000603642 413 ntBASIC2.7□□□□□ -1.98
CMC4P56277 AC092354.2-201ENST00000607786 514 ntBASIC2.7□□□□□ -1.98
CMC4P56277 MIR8084-201ENST00000614105 89 ntBASIC2.7□□□□□ -1.98
CMC4P56277 uc_338.32-201ENST00000615087 172 ntBASIC2.7□□□□□ -1.98
CMC4P56277 AC121761.2-201ENST00000617300 689 ntBASIC2.7□□□□□ -1.98
CMC4P56277 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CMC4P56277 AC095050.2-201ENST00000510748 1458 ntBASIC2.7□□□□□ -1.98
CMC4P56277 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.7□□□□□ -1.98
CMC4P56277 ST7-221ENST00000465133 2155 ntTSL 5 BASIC2.7□□□□□ -1.98
CMC4P56277 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CMC4P56277 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CMC4P56277 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CMC4P56277 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CMC4P56277 AC073055.1-201ENST00000456901 1621 ntBASIC2.69□□□□□ -1.98
CMC4P56277 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CMC4P56277 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CMC4P56277 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CMC4P56277 SNORA31-201ENST00000362607 130 ntBASIC2.69□□□□□ -1.98
CMC4P56277 Y_RNA.126-201ENST00000363382 111 ntBASIC2.69□□□□□ -1.98
CMC4P56277 MIR525-201ENST00000384978 85 ntBASIC2.69□□□□□ -1.98
CMC4P56277 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CMC4P56277 ATP5F1P4-201ENST00000397288 746 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AP002784.2-201ENST00000397300 549 ntBASIC2.69□□□□□ -1.98
CMC4P56277 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.69□□□□□ -1.98
CMC4P56277 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.69□□□□□ -1.98
CMC4P56277 RNA5SP39-201ENST00000411245 120 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.69□□□□□ -1.98
CMC4P56277 EI24P1-201ENST00000416584 867 ntBASIC2.69□□□□□ -1.98
CMC4P56277 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC2.69□□□□□ -1.98
CMC4P56277 RPL21P109-201ENST00000422213 475 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.69□□□□□ -1.98
CMC4P56277 MTATP6P11-201ENST00000428071 670 ntBASIC2.69□□□□□ -1.98
CMC4P56277 YWHAZP8-201ENST00000436935 731 ntBASIC2.69□□□□□ -1.98
CMC4P56277 SKP1P1-201ENST00000438081 489 ntBASIC2.69□□□□□ -1.98
CMC4P56277 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.69□□□□□ -1.98
CMC4P56277 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.69□□□□□ -1.98
CMC4P56277 RAB11AP1-201ENST00000442978 646 ntBASIC2.69□□□□□ -1.98
CMC4P56277 Z95327.1-201ENST00000446082 482 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AL929288.2-201ENST00000446368 407 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.69□□□□□ -1.98
CMC4P56277 PDSS1P2-201ENST00000449397 678 ntBASIC2.69□□□□□ -1.98
CMC4P56277 MTCO3P16-201ENST00000454456 754 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AC087879.1-201ENST00000474343 374 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AC106707.2-201ENST00000484182 374 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AP002812.1-201ENST00000495378 474 ntBASIC2.69□□□□□ -1.98
CMC4P56277 RNF138P1-201ENST00000502765 546 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AC005921.1-201ENST00000510589 286 ntBASIC2.69□□□□□ -1.98
CMC4P56277 RNU6-352P-201ENST00000516908 107 ntBASIC2.69□□□□□ -1.98
CMC4P56277 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CMC4P56277 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC2.69□□□□□ -1.98
CMC4P56277 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CMC4P56277 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.69□□□□□ -1.98
CMC4P56277 AC004217.3-201ENST00000551552 878 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.69□□□□□ -1.98
CMC4P56277 EIF5A2P1-201ENST00000564027 460 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AC010928.3-201ENST00000587712 541 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AC020914.4-201ENST00000597690 277 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.69□□□□□ -1.98
CMC4P56277 AC007687.1-201ENST00000602704 304 ntBASIC2.69□□□□□ -1.98
CMC4P56277 SNORA51-201ENST00000606420 132 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AP004247.3-201ENST00000608682 624 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AL391261.4-201ENST00000616012 481 ntBASIC2.69□□□□□ -1.98
CMC4P56277 AC110801.1-201ENST00000623590 212 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 7.5 ms