Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SUMO3P55854 SMG1P4-204ENST00000523028 4131 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.52□□□□□ -1.69
SUMO3P55854 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SUMO3P55854 NMD3P1-201ENST00000439704 1488 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.52□□□□□ -1.69
SUMO3P55854 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SUMO3P55854 RNA5SP258-201ENST00000362750 119 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SUMO3P55854 MIR105-2-201ENST00000385083 81 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AL356421.1-201ENST00000403255 413 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 GJA6P-201ENST00000415117 1042 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC093162.1-201ENST00000419682 124 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.52□□□□□ -1.69
SUMO3P55854 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.52□□□□□ -1.69
SUMO3P55854 USP9YP14-201ENST00000430663 563 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.52□□□□□ -1.69
SUMO3P55854 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.52□□□□□ -1.69
SUMO3P55854 AC092162.1-201ENST00000432828 434 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.52□□□□□ -1.69
SUMO3P55854 MTCYBP45-201ENST00000435243 565 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 FAM103A2P-201ENST00000444122 354 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 MTND1P27-201ENST00000451117 902 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.52□□□□□ -1.69
SUMO3P55854 AL033528.1-201ENST00000453780 140 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 snoU13.8-201ENST00000458890 104 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 RN7SL319P-201ENST00000480656 221 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 LARP1BP2-201ENST00000486594 519 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 RN7SL97P-201ENST00000486780 299 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.52□□□□□ -1.69
SUMO3P55854 AC023424.2-201ENST00000493479 777 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC008953.1-201ENST00000497334 318 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC112204.1-201ENST00000502591 103 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC140172.1-201ENST00000502928 141 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.52□□□□□ -1.69
SUMO3P55854 RNU6-405P-201ENST00000516637 110 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 RN7SKP116-201ENST00000516902 319 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.52□□□□□ -1.69
SUMO3P55854 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.52□□□□□ -1.69
SUMO3P55854 AP002453.2-201ENST00000533503 320 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.52□□□□□ -1.69
SUMO3P55854 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.52□□□□□ -1.69
SUMO3P55854 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.52□□□□□ -1.69
SUMO3P55854 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.52□□□□□ -1.69
SUMO3P55854 BNIP3P8-201ENST00000597863 560 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC073091.2-201ENST00000603205 907 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC087763.1-201ENST00000603391 286 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC080078.2-201ENST00000603766 501 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 SEPT7P9-203ENST00000604116 343 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AL136363.2-201ENST00000604173 851 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC112191.3-201ENST00000604371 277 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AC068870.2-201ENST00000620635 389 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.52□□□□□ -1.69
SUMO3P55854 AC018445.2-201ENST00000622987 260 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AP006248.2-201ENST00000623309 592 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 AL359740.1-201ENST00000624340 592 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.52□□□□□ -1.69
SUMO3P55854 AP000542.2-201ENST00000623199 6179 ntBASIC4.52□□□□□ -1.69
SUMO3P55854 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.52□□□□□ -1.69
SUMO3P55854 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SUMO3P55854 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.52□□□□□ -1.69
SUMO3P55854 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.52□□□□□ -1.69
SUMO3P55854 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SUMO3P55854 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.52□□□□□ -1.69
SUMO3P55854 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.51□□□□□ -1.69
SUMO3P55854 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SUMO3P55854 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SUMO3P55854 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.51□□□□□ -1.69
SUMO3P55854 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SUMO3P55854 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SUMO3P55854 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.51□□□□□ -1.69
SUMO3P55854 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SUMO3P55854 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SUMO3P55854 RNU6-356P-201ENST00000384140 107 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 RNU6-809P-201ENST00000384461 107 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SUMO3P55854 SNORA40.3-201ENST00000390964 122 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 SNORD115.1-201ENST00000391109 76 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 SPTLC1P2-201ENST00000407089 121 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.51□□□□□ -1.69
SUMO3P55854 AL031779.1-201ENST00000415663 330 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.51□□□□□ -1.69
SUMO3P55854 HMGN2P27-201ENST00000427352 270 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.51□□□□□ -1.69
SUMO3P55854 AL357520.1-201ENST00000441557 453 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 HMGB3P9-201ENST00000441799 583 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.51□□□□□ -1.69
SUMO3P55854 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.51□□□□□ -1.69
SUMO3P55854 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.51□□□□□ -1.69
SUMO3P55854 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.51□□□□□ -1.69
SUMO3P55854 snoU109.1-201ENST00000459339 135 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 RPL7AP6-201ENST00000477943 801 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 AC090686.1-201ENST00000481577 749 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.51□□□□□ -1.69
SUMO3P55854 COX7A2P2-201ENST00000505291 250 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SUMO3P55854 AC008638.1-201ENST00000506035 866 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SUMO3P55854 AC109464.2-201ENST00000510242 943 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 CDC42P4-201ENST00000510507 563 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms