Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC004865.1-201ENST00000442276 1003 ntBASIC3.45□□□□□ -1.86
LIM2P55344 RPS26P30-201ENST00000443431 335 ntBASIC3.45□□□□□ -1.86
LIM2P55344 RPS29P31-201ENST00000446147 164 ntBASIC3.45□□□□□ -1.86
LIM2P55344 AC005002.1-201ENST00000447458 540 ntBASIC3.45□□□□□ -1.86
LIM2P55344 AC010655.1-201ENST00000449336 292 ntBASIC3.45□□□□□ -1.86
LIM2P55344 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.45□□□□□ -1.86
LIM2P55344 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 NAMPTP2-201ENST00000505629 1115 ntBASIC3.45□□□□□ -1.86
LIM2P55344 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.45□□□□□ -1.86
LIM2P55344 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.45□□□□□ -1.86
LIM2P55344 RNU6-416P-201ENST00000516265 103 ntBASIC3.45□□□□□ -1.86
LIM2P55344 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.45□□□□□ -1.86
LIM2P55344 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.45□□□□□ -1.86
LIM2P55344 MTCO1P49-201ENST00000523429 802 ntBASIC3.45□□□□□ -1.86
LIM2P55344 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.45□□□□□ -1.86
LIM2P55344 MTND5P21-201ENST00000531961 522 ntBASIC3.45□□□□□ -1.86
LIM2P55344 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.45□□□□□ -1.86
LIM2P55344 AC023161.2-201ENST00000551218 780 ntBASIC3.45□□□□□ -1.86
LIM2P55344 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.45□□□□□ -1.86
LIM2P55344 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.45□□□□□ -1.86
LIM2P55344 MTCO1P40-201ENST00000574371 625 ntBASIC3.45□□□□□ -1.86
LIM2P55344 TMF1P1-201ENST00000576058 373 ntBASIC3.45□□□□□ -1.86
LIM2P55344 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.45□□□□□ -1.86
LIM2P55344 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.45□□□□□ -1.86
LIM2P55344 KLKP1-201ENST00000595979 403 ntBASIC3.45□□□□□ -1.86
LIM2P55344 OR6R2P-201ENST00000609216 300 ntBASIC3.45□□□□□ -1.86
LIM2P55344 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.45□□□□□ -1.86
LIM2P55344 AC124016.2-201ENST00000610058 665 ntBASIC3.45□□□□□ -1.86
LIM2P55344 AL133445.2-201ENST00000611191 527 ntBASIC3.45□□□□□ -1.86
LIM2P55344 AC105227.2-201ENST00000615075 605 ntBASIC3.45□□□□□ -1.86
LIM2P55344 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.45□□□□□ -1.86
LIM2P55344 AL356863.1-201ENST00000623378 1080 ntBASIC3.45□□□□□ -1.86
LIM2P55344 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.45□□□□□ -1.86
LIM2P55344 FAM157B-203ENST00000639350 358 ntBASIC3.45□□□□□ -1.86
LIM2P55344 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.45□□□□□ -1.86
LIM2P55344 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
LIM2P55344 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
LIM2P55344 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 AC107081.3-201ENST00000612715 2034 ntBASIC3.44□□□□□ -1.86
LIM2P55344 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.44□□□□□ -1.86
LIM2P55344 MFSD8-236ENST00000641509 4050 ntBASIC3.44□□□□□ -1.86
LIM2P55344 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LIM2P55344 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
LIM2P55344 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.44□□□□□ -1.86
LIM2P55344 MTND5P28-201ENST00000438005 1594 ntBASIC3.44□□□□□ -1.86
LIM2P55344 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LIM2P55344 RNA5SP502-201ENST00000362694 119 ntBASIC3.44□□□□□ -1.86
LIM2P55344 RNA5SP124-201ENST00000362739 110 ntBASIC3.44□□□□□ -1.86
LIM2P55344 RNU6-1293P-201ENST00000384077 107 ntBASIC3.44□□□□□ -1.86
LIM2P55344 MIR134-201ENST00000385258 73 ntBASIC3.44□□□□□ -1.86
LIM2P55344 RPL21P17-201ENST00000397467 475 ntBASIC3.44□□□□□ -1.86
LIM2P55344 MTHFD2P2-201ENST00000407725 247 ntBASIC3.44□□□□□ -1.86
LIM2P55344 AC069282.1-201ENST00000411911 526 ntBASIC3.44□□□□□ -1.86
LIM2P55344 OR51A3P-201ENST00000413596 924 ntBASIC3.44□□□□□ -1.86
LIM2P55344 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.44□□□□□ -1.86
LIM2P55344 PTP4A1P7-201ENST00000423476 514 ntBASIC3.44□□□□□ -1.86
LIM2P55344 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.44□□□□□ -1.86
LIM2P55344 UBE2V1P1-201ENST00000430836 445 ntBASIC3.44□□□□□ -1.86
LIM2P55344 AL513175.1-201ENST00000431492 780 ntBASIC3.44□□□□□ -1.86
LIM2P55344 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.44□□□□□ -1.86
LIM2P55344 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.44□□□□□ -1.86
LIM2P55344 AC122718.1-201ENST00000439448 744 ntBASIC3.44□□□□□ -1.86
LIM2P55344 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.44□□□□□ -1.86
LIM2P55344 FAM133DP-201ENST00000464802 691 ntBASIC3.44□□□□□ -1.86
LIM2P55344 RN7SL542P-201ENST00000467147 294 ntBASIC3.44□□□□□ -1.86
LIM2P55344 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.44□□□□□ -1.86
LIM2P55344 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.44□□□□□ -1.86
LIM2P55344 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.44□□□□□ -1.86
LIM2P55344 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.44□□□□□ -1.86
LIM2P55344 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.44□□□□□ -1.86
LIM2P55344 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.44□□□□□ -1.86
LIM2P55344 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.44□□□□□ -1.86
LIM2P55344 OR5AP1P-201ENST00000529730 940 ntBASIC3.44□□□□□ -1.86
LIM2P55344 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.44□□□□□ -1.86
LIM2P55344 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.44□□□□□ -1.86
LIM2P55344 AC006518.2-201ENST00000542513 940 ntBASIC3.44□□□□□ -1.86
LIM2P55344 CYP2C60P-201ENST00000566088 139 ntBASIC3.44□□□□□ -1.86
LIM2P55344 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.44□□□□□ -1.86
LIM2P55344 MIR4738-201ENST00000579134 87 ntBASIC3.44□□□□□ -1.86
LIM2P55344 AP001180.3-201ENST00000582221 145 ntBASIC3.44□□□□□ -1.86
LIM2P55344 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.44□□□□□ -1.86
LIM2P55344 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.44□□□□□ -1.86
LIM2P55344 AP003117.2-201ENST00000606010 545 ntBASIC3.44□□□□□ -1.86
LIM2P55344 AC022079.2-201ENST00000619739 566 ntBASIC3.44□□□□□ -1.86
LIM2P55344 RNU6-156P-201ENST00000621869 107 ntBASIC3.44□□□□□ -1.86
LIM2P55344 AL161637.1-201ENST00000622380 412 ntBASIC3.44□□□□□ -1.86
LIM2P55344 AL732618.1-201ENST00000623251 301 ntBASIC3.44□□□□□ -1.86
LIM2P55344 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.44□□□□□ -1.86
LIM2P55344 AL121594.5-201ENST00000631724 573 ntBASIC3.44□□□□□ -1.86
LIM2P55344 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.44□□□□□ -1.86
LIM2P55344 AC009452.1-201ENST00000640823 606 ntBASIC3.44□□□□□ -1.86
LIM2P55344 AC119674.1-207ENST00000641355 633 ntBASIC3.44□□□□□ -1.86
LIM2P55344 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.44□□□□□ -1.86
LIM2P55344 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms