Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
VCPP55072 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VCPP55072 AL049737.1-201ENST00000413920 1403 ntBASIC4.04□□□□□ -1.76
VCPP55072 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.04□□□□□ -1.76
VCPP55072 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 MTND4P10-201ENST00000446199 1363 ntBASIC4.04□□□□□ -1.76
VCPP55072 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.04□□□□□ -1.76
VCPP55072 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VCPP55072 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 MIR423-201ENST00000362201 94 ntBASIC4.04□□□□□ -1.76
VCPP55072 RNU6-796P-201ENST00000391086 107 ntBASIC4.04□□□□□ -1.76
VCPP55072 ATP5F1P6-201ENST00000402768 767 ntBASIC4.04□□□□□ -1.76
VCPP55072 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.04□□□□□ -1.76
VCPP55072 RNU4-27P-201ENST00000410889 139 ntBASIC4.04□□□□□ -1.76
VCPP55072 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.04□□□□□ -1.76
VCPP55072 AL139247.1-201ENST00000422768 325 ntBASIC4.04□□□□□ -1.76
VCPP55072 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.04□□□□□ -1.76
VCPP55072 AL512661.1-201ENST00000434586 1253 ntBASIC4.04□□□□□ -1.76
VCPP55072 AC006994.1-201ENST00000438212 839 ntBASIC4.04□□□□□ -1.76
VCPP55072 AC092809.1-201ENST00000441469 474 ntBASIC4.04□□□□□ -1.76
VCPP55072 AC097499.1-201ENST00000444277 208 ntBASIC4.04□□□□□ -1.76
VCPP55072 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.04□□□□□ -1.76
VCPP55072 RPS20P32-201ENST00000456044 356 ntBASIC4.04□□□□□ -1.76
VCPP55072 AL133162.1-201ENST00000463228 453 ntBASIC4.04□□□□□ -1.76
VCPP55072 AL049829.1-201ENST00000465411 156 ntBASIC4.04□□□□□ -1.76
VCPP55072 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.04□□□□□ -1.76
VCPP55072 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.04□□□□□ -1.76
VCPP55072 AP001086.1-201ENST00000494882 321 ntBASIC4.04□□□□□ -1.76
VCPP55072 AC004069.2-201ENST00000505438 1114 ntBASIC4.04□□□□□ -1.76
VCPP55072 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.04□□□□□ -1.76
VCPP55072 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.04□□□□□ -1.76
VCPP55072 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.04□□□□□ -1.76
VCPP55072 AC091515.1-201ENST00000548110 679 ntBASIC4.04□□□□□ -1.76
VCPP55072 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.04□□□□□ -1.76
VCPP55072 AC090877.1-201ENST00000561418 344 ntBASIC4.04□□□□□ -1.76
VCPP55072 AC006270.2-201ENST00000578523 652 ntBASIC4.04□□□□□ -1.76
VCPP55072 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.04□□□□□ -1.76
VCPP55072 AC244505.7-201ENST00000599675 272 ntBASIC4.04□□□□□ -1.76
VCPP55072 AC079610.2-201ENST00000604818 690 ntBASIC4.04□□□□□ -1.76
VCPP55072 AC011374.2-201ENST00000607135 526 ntBASIC4.04□□□□□ -1.76
VCPP55072 AL139089.1-201ENST00000620372 975 ntBASIC4.04□□□□□ -1.76
VCPP55072 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.04□□□□□ -1.76
VCPP55072 ATE1-AS1-202ENST00000636460 506 ntBASIC4.04□□□□□ -1.76
VCPP55072 AC138649.5-201ENST00000637456 137 ntBASIC4.04□□□□□ -1.76
VCPP55072 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.04□□□□□ -1.76
VCPP55072 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.04□□□□□ -1.76
VCPP55072 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
VCPP55072 AC022031.1-201ENST00000585985 2593 ntBASIC4.04□□□□□ -1.76
VCPP55072 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VCPP55072 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
VCPP55072 RNU1-18P-201ENST00000363062 164 ntBASIC4.03□□□□□ -1.76
VCPP55072 RNA5SP97-201ENST00000365006 84 ntBASIC4.03□□□□□ -1.76
VCPP55072 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.03□□□□□ -1.76
VCPP55072 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
VCPP55072 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VCPP55072 RNU6-1005P-201ENST00000384519 107 ntBASIC4.03□□□□□ -1.76
VCPP55072 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VCPP55072 HLFP1-201ENST00000402375 499 ntBASIC4.03□□□□□ -1.76
VCPP55072 MIR1289-1-201ENST00000408836 144 ntBASIC4.03□□□□□ -1.76
VCPP55072 AL158825.1-201ENST00000414735 521 ntBASIC4.03□□□□□ -1.76
VCPP55072 PNRC2P1-201ENST00000423940 420 ntBASIC4.03□□□□□ -1.76
VCPP55072 VN1R42P-201ENST00000424651 344 ntBASIC4.03□□□□□ -1.76
VCPP55072 AC097713.2-201ENST00000430199 356 ntBASIC4.03□□□□□ -1.76
VCPP55072 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.03□□□□□ -1.76
VCPP55072 RN7SL93P-201ENST00000463035 293 ntBASIC4.03□□□□□ -1.76
VCPP55072 RN7SL601P-201ENST00000471221 293 ntBASIC4.03□□□□□ -1.76
VCPP55072 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.03□□□□□ -1.76
VCPP55072 USP9YP5-201ENST00000511770 630 ntBASIC4.03□□□□□ -1.76
VCPP55072 AC133963.2-201ENST00000513686 578 ntBASIC4.03□□□□□ -1.76
VCPP55072 AC005798.1-201ENST00000513715 387 ntBASIC4.03□□□□□ -1.76
VCPP55072 CR383656.14-201ENST00000551951 406 ntBASIC4.03□□□□□ -1.76
VCPP55072 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.03□□□□□ -1.76
VCPP55072 AC098483.2-201ENST00000603158 454 ntBASIC4.03□□□□□ -1.76
VCPP55072 AC116312.1-201ENST00000606841 314 ntBASIC4.03□□□□□ -1.76
VCPP55072 AC121761.2-201ENST00000617300 689 ntBASIC4.03□□□□□ -1.76
VCPP55072 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.03□□□□□ -1.76
VCPP55072 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.03□□□□□ -1.76
VCPP55072 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
VCPP55072 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
VCPP55072 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.03□□□□□ -1.76
VCPP55072 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VCPP55072 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.02□□□□□ -1.77
VCPP55072 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCPP55072 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCPP55072 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VCPP55072 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCPP55072 RNU6-98P-201ENST00000384173 107 ntBASIC4.02□□□□□ -1.77
VCPP55072 SNORA70E-201ENST00000384492 135 ntBASIC4.02□□□□□ -1.77
VCPP55072 U3.26-201ENST00000391236 204 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms