Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 GTF2IP23-201ENST00000423746 351 ntBASIC3.6□□□□□ -1.83
NUP98P52948 AL589765.3-201ENST00000446084 462 ntBASIC3.6□□□□□ -1.83
NUP98P52948 RPS6P2-201ENST00000454208 705 ntBASIC3.6□□□□□ -1.83
NUP98P52948 RPL31P50-201ENST00000471002 296 ntBASIC3.6□□□□□ -1.83
NUP98P52948 AC113430.1-201ENST00000506872 718 ntBASIC3.6□□□□□ -1.83
NUP98P52948 SCGB1D5P-201ENST00000515134 247 ntBASIC3.6□□□□□ -1.83
NUP98P52948 OR4C2P-201ENST00000530855 1064 ntBASIC3.6□□□□□ -1.83
NUP98P52948 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP98P52948 AC015911.5-201ENST00000587076 451 ntBASIC3.6□□□□□ -1.83
NUP98P52948 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP98P52948 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NUP98P52948 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NUP98P52948 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.59□□□□□ -1.83
NUP98P52948 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NUP98P52948 SKINT1L-201ENST00000401057 817 ntBASIC3.59□□□□□ -1.83
NUP98P52948 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.59□□□□□ -1.83
NUP98P52948 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.59□□□□□ -1.83
NUP98P52948 AC118465.1-201ENST00000513820 1271 ntBASIC3.59□□□□□ -1.83
NUP98P52948 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.59□□□□□ -1.83
NUP98P52948 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.59□□□□□ -1.83
NUP98P52948 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.59□□□□□ -1.83
NUP98P52948 AL591516.1-201ENST00000611326 274 ntBASIC3.59□□□□□ -1.83
NUP98P52948 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NUP98P52948 AC245100.2-201ENST00000454544 1679 ntBASIC3.59□□□□□ -1.83
NUP98P52948 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.59□□□□□ -1.84
NUP98P52948 AL031985.3-201ENST00000565390 2449 ntBASIC3.59□□□□□ -1.84
NUP98P52948 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NUP98P52948 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP98P52948 BMS1P22-201ENST00000414726 313 ntBASIC3.58□□□□□ -1.84
NUP98P52948 RPL23AP22-201ENST00000437556 453 ntBASIC3.58□□□□□ -1.84
NUP98P52948 RPL7P28-201ENST00000437739 740 ntBASIC3.58□□□□□ -1.84
NUP98P52948 AP000936.3-201ENST00000438127 255 ntBASIC3.58□□□□□ -1.84
NUP98P52948 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.58□□□□□ -1.84
NUP98P52948 RPL7L1P1-201ENST00000448259 785 ntBASIC3.58□□□□□ -1.84
NUP98P52948 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP98P52948 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.58□□□□□ -1.84
NUP98P52948 AL049874.4-201ENST00000557593 255 ntBASIC3.58□□□□□ -1.84
NUP98P52948 AC234778.2-201ENST00000566241 354 ntBASIC3.58□□□□□ -1.84
NUP98P52948 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP98P52948 AL137072.1-201ENST00000603444 466 ntBASIC3.58□□□□□ -1.84
NUP98P52948 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
NUP98P52948 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP98P52948 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUP98P52948 AC015813.6-201ENST00000624409 5808 ntBASIC3.58□□□□□ -1.84
NUP98P52948 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NUP98P52948 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUP98P52948 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NUP98P52948 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NUP98P52948 RAB28P3-201ENST00000448325 597 ntBASIC3.58□□□□□ -1.84
NUP98P52948 AC117522.3-201ENST00000507974 584 ntBASIC3.58□□□□□ -1.84
NUP98P52948 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.58□□□□□ -1.84
NUP98P52948 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.58□□□□□ -1.84
NUP98P52948 RPL23AP92-201ENST00000603609 255 ntBASIC3.58□□□□□ -1.84
NUP98P52948 AC013412.1-201ENST00000610687 192 ntBASIC3.58□□□□□ -1.84
NUP98P52948 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUP98P52948 MIR423-201ENST00000362201 94 ntBASIC3.57□□□□□ -1.84
NUP98P52948 RNU4-82P-201ENST00000362443 140 ntBASIC3.57□□□□□ -1.84
NUP98P52948 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.57□□□□□ -1.84
NUP98P52948 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.57□□□□□ -1.84
NUP98P52948 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.57□□□□□ -1.84
NUP98P52948 AC111000.2-201ENST00000507775 550 ntBASIC3.57□□□□□ -1.84
NUP98P52948 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.57□□□□□ -1.84
NUP98P52948 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.57□□□□□ -1.84
NUP98P52948 AC016542.2-201ENST00000624201 619 ntBASIC3.57□□□□□ -1.84
NUP98P52948 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUP98P52948 RNU1-35P-201ENST00000362782 153 ntBASIC3.56□□□□□ -1.84
NUP98P52948 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
NUP98P52948 RN7SKP247-201ENST00000411094 308 ntBASIC3.56□□□□□ -1.84
NUP98P52948 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP98P52948 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP98P52948 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.56□□□□□ -1.84
NUP98P52948 RPL7P59-201ENST00000447700 943 ntBASIC3.56□□□□□ -1.84
NUP98P52948 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP98P52948 AL121877.1-201ENST00000453704 622 ntBASIC3.56□□□□□ -1.84
NUP98P52948 RN7SL429P-201ENST00000479090 223 ntBASIC3.56□□□□□ -1.84
NUP98P52948 RN7SL489P-201ENST00000486185 223 ntBASIC3.56□□□□□ -1.84
NUP98P52948 RN7SL327P-201ENST00000488659 223 ntBASIC3.56□□□□□ -1.84
NUP98P52948 AC005351.1-201ENST00000511152 786 ntBASIC3.56□□□□□ -1.84
NUP98P52948 RN7SKP43-201ENST00000516173 320 ntBASIC3.56□□□□□ -1.84
NUP98P52948 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.56□□□□□ -1.84
NUP98P52948 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.56□□□□□ -1.84
NUP98P52948 AC107294.1-201ENST00000609524 467 ntBASIC3.56□□□□□ -1.84
NUP98P52948 RN7SL853P-201ENST00000617250 223 ntBASIC3.56□□□□□ -1.84
NUP98P52948 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NUP98P52948 AC006111.3-201ENST00000622137 383 ntBASIC3.56□□□□□ -1.84
NUP98P52948 LINC01355-201ENST00000566551 5444 ntBASIC3.56□□□□□ -1.84
NUP98P52948 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NUP98P52948 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NUP98P52948 AL139039.1-201ENST00000401900 692 ntBASIC3.56□□□□□ -1.84
NUP98P52948 RNA5SP293-201ENST00000410527 113 ntBASIC3.56□□□□□ -1.84
NUP98P52948 AC128713.1-201ENST00000471495 306 ntBASIC3.56□□□□□ -1.84
NUP98P52948 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP98P52948 AC103783.1-201ENST00000520506 373 ntBASIC3.56□□□□□ -1.84
NUP98P52948 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP98P52948 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP98P52948 AC096947.1-201ENST00000603233 470 ntBASIC3.56□□□□□ -1.84
NUP98P52948 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NUP98P52948 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NUP98P52948 MTCO1P22-201ENST00000604619 1360 ntBASIC3.55□□□□□ -1.84
NUP98P52948 U3.6-201ENST00000363622 211 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms