Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AP005119.2-201ENST00000579735 1105 ntBASIC5.49□□□□□ -1.53
MRE11P49959 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.49□□□□□ -1.53
MRE11P49959 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.49□□□□□ -1.53
MRE11P49959 VN1R85P-201ENST00000601587 426 ntBASIC5.49□□□□□ -1.53
MRE11P49959 AP000403.1-201ENST00000603349 851 ntBASIC5.49□□□□□ -1.53
MRE11P49959 AL391358.1-201ENST00000605342 190 ntBASIC5.49□□□□□ -1.53
MRE11P49959 AC012360.2-201ENST00000609349 391 ntBASIC5.49□□□□□ -1.53
MRE11P49959 AC005962.2-201ENST00000611427 652 ntBASIC5.49□□□□□ -1.53
MRE11P49959 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.49□□□□□ -1.53
MRE11P49959 AC099654.12-201ENST00000639868 649 ntBASIC5.49□□□□□ -1.53
MRE11P49959 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
MRE11P49959 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MRE11P49959 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
MRE11P49959 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MRE11P49959 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
MRE11P49959 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MRE11P49959 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.49□□□□□ -1.53
MRE11P49959 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MRE11P49959 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
MRE11P49959 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MRE11P49959 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
MRE11P49959 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MRE11P49959 PHKBP1-201ENST00000450951 1951 ntBASIC5.48□□□□□ -1.53
MRE11P49959 Z99496.1-201ENST00000469424 1477 ntBASIC5.48□□□□□ -1.53
MRE11P49959 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
MRE11P49959 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MRE11P49959 Y_RNA.248-201ENST00000364501 109 ntBASIC5.48□□□□□ -1.53
MRE11P49959 RNU4-91P-201ENST00000364778 135 ntBASIC5.48□□□□□ -1.53
MRE11P49959 RNY3P14-201ENST00000384309 102 ntBASIC5.48□□□□□ -1.53
MRE11P49959 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
MRE11P49959 ARL4AP5-201ENST00000404372 599 ntBASIC5.48□□□□□ -1.53
MRE11P49959 RNA5SP498-201ENST00000411342 120 ntBASIC5.48□□□□□ -1.53
MRE11P49959 GJA6P-201ENST00000415117 1042 ntBASIC5.48□□□□□ -1.53
MRE11P49959 RPL23AP39-201ENST00000415533 405 ntBASIC5.48□□□□□ -1.53
MRE11P49959 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.48□□□□□ -1.53
MRE11P49959 FNDC3CP-201ENST00000420795 1155 ntBASIC5.48□□□□□ -1.53
MRE11P49959 GAPDHP49-201ENST00000421421 961 ntBASIC5.48□□□□□ -1.53
MRE11P49959 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.48□□□□□ -1.53
MRE11P49959 AL050321.1-201ENST00000432363 400 ntBASIC5.48□□□□□ -1.53
MRE11P49959 CYCSP11-201ENST00000436426 315 ntBASIC5.48□□□□□ -1.53
MRE11P49959 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.48□□□□□ -1.53
MRE11P49959 AL450263.2-201ENST00000439400 589 ntBASIC5.48□□□□□ -1.53
MRE11P49959 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.48□□□□□ -1.53
MRE11P49959 AL592447.1-201ENST00000447592 540 ntBASIC5.48□□□□□ -1.53
MRE11P49959 AL354710.1-201ENST00000453641 246 ntBASIC5.48□□□□□ -1.53
MRE11P49959 MTCO3P11-201ENST00000455103 774 ntBASIC5.48□□□□□ -1.53
MRE11P49959 RNA5SP269-201ENST00000459032 137 ntBASIC5.48□□□□□ -1.53
MRE11P49959 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.48□□□□□ -1.53
MRE11P49959 ARL2BPP4-201ENST00000506854 471 ntBASIC5.48□□□□□ -1.53
MRE11P49959 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.48□□□□□ -1.53
MRE11P49959 MTND4LP18-201ENST00000526864 291 ntBASIC5.48□□□□□ -1.53
MRE11P49959 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
MRE11P49959 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.48□□□□□ -1.53
MRE11P49959 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.48□□□□□ -1.53
MRE11P49959 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
MRE11P49959 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.48□□□□□ -1.53
MRE11P49959 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.48□□□□□ -1.53
MRE11P49959 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.48□□□□□ -1.53
MRE11P49959 AP003973.1-201ENST00000604639 691 ntBASIC5.48□□□□□ -1.53
MRE11P49959 AC007684.1-201ENST00000609671 477 ntBASIC5.48□□□□□ -1.53
MRE11P49959 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.48□□□□□ -1.53
MRE11P49959 AC095031.1-201ENST00000623685 672 ntBASIC5.48□□□□□ -1.53
MRE11P49959 AC025048.6-202ENST00000627667 438 ntBASIC5.48□□□□□ -1.53
MRE11P49959 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MRE11P49959 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.48□□□□□ -1.53
MRE11P49959 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
MRE11P49959 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.48□□□□□ -1.53
MRE11P49959 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.48□□□□□ -1.53
MRE11P49959 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.48□□□□□ -1.53
MRE11P49959 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.48□□□□□ -1.53
MRE11P49959 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
MRE11P49959 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MRE11P49959 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.48□□□□□ -1.53
MRE11P49959 SDAD1P1-202ENST00000524156 2051 ntBASIC5.47□□□□□ -1.53
MRE11P49959 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
MRE11P49959 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
MRE11P49959 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MRE11P49959 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MRE11P49959 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
MRE11P49959 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MRE11P49959 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MRE11P49959 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
MRE11P49959 RNU6-225P-201ENST00000384613 103 ntBASIC5.47□□□□□ -1.53
MRE11P49959 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MRE11P49959 AL009174.1-201ENST00000426577 416 ntBASIC5.47□□□□□ -1.53
MRE11P49959 DPPA2P1-201ENST00000428060 556 ntBASIC5.47□□□□□ -1.53
MRE11P49959 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.47□□□□□ -1.53
MRE11P49959 SKP1P3-201ENST00000429280 487 ntBASIC5.47□□□□□ -1.53
MRE11P49959 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.47□□□□□ -1.53
MRE11P49959 RPL23AP83-201ENST00000434984 473 ntBASIC5.47□□□□□ -1.53
MRE11P49959 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.47□□□□□ -1.53
MRE11P49959 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.47□□□□□ -1.53
MRE11P49959 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.47□□□□□ -1.53
MRE11P49959 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.47□□□□□ -1.53
MRE11P49959 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.47□□□□□ -1.53
MRE11P49959 COX6CP18-201ENST00000448769 222 ntBASIC5.47□□□□□ -1.53
MRE11P49959 AC243772.1-201ENST00000451620 410 ntBASIC5.47□□□□□ -1.53
MRE11P49959 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MRE11P49959 AC027673.1-201ENST00000456245 405 ntBASIC5.47□□□□□ -1.53
MRE11P49959 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms