Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RPL21P110-201ENST00000433345 446 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CR1P49238 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CR1P49238 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CR1P49238 AC006539.3-201ENST00000454258 129 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 RPS15AP1-201ENST00000457423 391 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 AC007537.2-201ENST00000472093 511 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 SYPL1P1-201ENST00000473622 768 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 RPL7P47-201ENST00000497299 556 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 AC010468.3-201ENST00000508225 458 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.22□□□□□ -1.89
CX3CR1P49238 SNORA76.2-201ENST00000517095 137 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 AC004217.3-201ENST00000551552 878 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 PARP1P2-201ENST00000556806 195 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.22□□□□□ -1.89
CX3CR1P49238 AC095057.3-201ENST00000567102 1157 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 AC106734.1-201ENST00000568646 663 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.22□□□□□ -1.89
CX3CR1P49238 AC087499.8-201ENST00000578406 226 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 AC053481.4-201ENST00000583164 216 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CR1P49238 AC022146.1-201ENST00000595307 847 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 BNIP3P4-201ENST00000604946 565 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 HSPE1P14-201ENST00000605812 302 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CR1P49238 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 AC008121.2-201ENST00000614647 523 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 AL354798.1-201ENST00000622505 329 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 AP000553.6-201ENST00000641242 118 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CX3CR1P49238 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.22□□□□□ -1.89
CX3CR1P49238 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.21□□□□□ -1.89
CX3CR1P49238 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CX3CR1P49238 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CX3CR1P49238 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CX3CR1P49238 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CR1P49238 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CX3CR1P49238 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CR1P49238 RNU6-374P-201ENST00000364146 108 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 SNORA51.2-201ENST00000364595 132 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 RNU6-283P-201ENST00000364788 107 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 RNU6-650P-201ENST00000365658 111 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.21□□□□□ -1.9
CX3CR1P49238 RNU6-629P-201ENST00000384061 103 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CX3CR1P49238 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.21□□□□□ -1.9
CX3CR1P49238 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.21□□□□□ -1.9
CX3CR1P49238 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.21□□□□□ -1.9
CX3CR1P49238 VDAC1P3-201ENST00000434069 851 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 ELOCP3-201ENST00000439303 348 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 AC092170.1-201ENST00000440211 356 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 AL662791.1-201ENST00000441992 928 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 AC017099.1-201ENST00000448261 1028 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 AC010655.1-201ENST00000449336 292 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 RNU7-170P-201ENST00000459303 61 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.21□□□□□ -1.9
CX3CR1P49238 RPL7L1P8-201ENST00000469911 741 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 AC078785.3-201ENST00000476607 425 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.21□□□□□ -1.9
CX3CR1P49238 RNF138P1-201ENST00000502765 546 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.21□□□□□ -1.9
CX3CR1P49238 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.21□□□□□ -1.9
CX3CR1P49238 PCBP2P3-201ENST00000509726 843 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 SETP12-201ENST00000514068 805 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 RNU6-1102P-201ENST00000516149 96 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 RN7SKP289-201ENST00000517244 295 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.21□□□□□ -1.9
CX3CR1P49238 OR5AP1P-201ENST00000529730 940 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.21□□□□□ -1.9
CX3CR1P49238 CR383656.14-201ENST00000551951 406 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 AC104229.1-201ENST00000561364 255 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.21□□□□□ -1.9
CX3CR1P49238 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.21□□□□□ -1.9
CX3CR1P49238 VN1R88P-201ENST00000596787 292 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.21□□□□□ -1.9
CX3CR1P49238 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.21□□□□□ -1.9
CX3CR1P49238 AC011492.1-201ENST00000600023 315 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 RNA5SP196-201ENST00000625967 102 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CR1P49238 OTUD4P1-201ENST00000237841 3067 ntBASIC3.21□□□□□ -1.9
CX3CR1P49238 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.21□□□□□ -1.9
CX3CR1P49238 AP001148.1-201ENST00000624124 2359 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CX3CR1P49238 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CX3CR1P49238 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CR1P49238 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CR1P49238 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CR1P49238 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CR1P49238 SNORD56.4-201ENST00000363883 71 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 RNU6-1226P-201ENST00000384317 107 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 AL590704.1-201ENST00000402856 794 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 LIPT1P1-201ENST00000415870 1186 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms