Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SOX2P48431 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX2P48431 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX2P48431 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.17□□□□□ -1.74
SOX2P48431 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX2P48431 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX2P48431 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SOX2P48431 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX2P48431 Y_RNA.41-201ENST00000362646 102 ntBASIC4.17□□□□□ -1.74
SOX2P48431 RNU6-1243P-201ENST00000364028 107 ntBASIC4.17□□□□□ -1.74
SOX2P48431 RNU6-289P-201ENST00000364093 107 ntBASIC4.17□□□□□ -1.74
SOX2P48431 RN7SKP15-201ENST00000364742 309 ntBASIC4.17□□□□□ -1.74
SOX2P48431 RNU6-1226P-201ENST00000384317 107 ntBASIC4.17□□□□□ -1.74
SOX2P48431 MIR195-201ENST00000385194 87 ntBASIC4.17□□□□□ -1.74
SOX2P48431 SNORA40.3-201ENST00000390964 122 ntBASIC4.17□□□□□ -1.74
SOX2P48431 SSXP10-201ENST00000402595 565 ntBASIC4.17□□□□□ -1.74
SOX2P48431 ARL4AP5-201ENST00000404372 599 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AL024474.1-201ENST00000404655 591 ntBASIC4.17□□□□□ -1.74
SOX2P48431 MIR1305-201ENST00000408300 86 ntBASIC4.17□□□□□ -1.74
SOX2P48431 OR3A2-201ENST00000408891 1076 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX2P48431 NPM1P4-201ENST00000414095 812 ntBASIC4.17□□□□□ -1.74
SOX2P48431 TPMTP2-201ENST00000414372 726 ntBASIC4.17□□□□□ -1.74
SOX2P48431 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX2P48431 RAD23BP2-201ENST00000416003 1207 ntBASIC4.17□□□□□ -1.74
SOX2P48431 NUP35P2-201ENST00000416748 943 ntBASIC4.17□□□□□ -1.74
SOX2P48431 OR2AM1P-201ENST00000422137 422 ntBASIC4.17□□□□□ -1.74
SOX2P48431 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX2P48431 RPS17P8-201ENST00000434525 335 ntBASIC4.17□□□□□ -1.74
SOX2P48431 RPS20P1-201ENST00000434853 354 ntBASIC4.17□□□□□ -1.74
SOX2P48431 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX2P48431 AC091862.1-201ENST00000438016 1100 ntBASIC4.17□□□□□ -1.74
SOX2P48431 MTATP6P13-201ENST00000438531 667 ntBASIC4.17□□□□□ -1.74
SOX2P48431 MTND5P14-201ENST00000441481 1267 ntBASIC4.17□□□□□ -1.74
SOX2P48431 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.17□□□□□ -1.74
SOX2P48431 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX2P48431 USP9YP12-201ENST00000450481 570 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX2P48431 SNORD42A-201ENST00000459584 64 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX2P48431 RPS18P6-201ENST00000476880 458 ntBASIC4.17□□□□□ -1.74
SOX2P48431 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
SOX2P48431 RPL9P33-201ENST00000484311 566 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC090453.1-201ENST00000495560 436 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC108941.1-201ENST00000502853 530 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC024558.1-201ENST00000505008 528 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC022447.3-201ENST00000506865 495 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC024589.1-201ENST00000512207 263 ntBASIC4.17□□□□□ -1.74
SOX2P48431 PAICSP4-201ENST00000517543 1253 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.17□□□□□ -1.74
SOX2P48431 MTND4LP18-201ENST00000526864 291 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.17□□□□□ -1.74
SOX2P48431 GSTP1P1-201ENST00000548078 319 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SOX2P48431 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX2P48431 AC016180.1-201ENST00000567945 403 ntBASIC4.17□□□□□ -1.74
SOX2P48431 MIR544B-201ENST00000582372 78 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.17□□□□□ -1.74
SOX2P48431 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.17□□□□□ -1.74
SOX2P48431 AC010424.2-201ENST00000607594 443 ntBASIC4.17□□□□□ -1.74
SOX2P48431 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SOX2P48431 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX2P48431 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SOX2P48431 AL022578.1-201ENST00000439330 1433 ntBASIC4.17□□□□□ -1.74
SOX2P48431 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX2P48431 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX2P48431 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX2P48431 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
SOX2P48431 Z95327.2-201ENST00000414579 1873 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC007529.1-201ENST00000418574 2178 ntBASIC4.17□□□□□ -1.74
SOX2P48431 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.17□□□□□ -1.74
SOX2P48431 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX2P48431 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.17□□□□□ -1.74
SOX2P48431 AC006378.2-201ENST00000623178 2476 ntBASIC4.17□□□□□ -1.74
SOX2P48431 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.17□□□□□ -1.74
SOX2P48431 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX2P48431 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX2P48431 AC097504.1-201ENST00000515103 2415 ntBASIC4.16□□□□□ -1.74
SOX2P48431 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX2P48431 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX2P48431 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SOX2P48431 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SOX2P48431 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX2P48431 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SOX2P48431 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SOX2P48431 MAPK10-304ENST00000641341 3984 ntBASIC4.16□□□□□ -1.74
SOX2P48431 RNA5SP428-201ENST00000365129 132 ntBASIC4.16□□□□□ -1.74
SOX2P48431 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SOX2P48431 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX2P48431 SNORA70-201ENST00000384436 135 ntBASIC4.16□□□□□ -1.74
SOX2P48431 RNU6-952P-201ENST00000391164 108 ntBASIC4.16□□□□□ -1.74
SOX2P48431 RPS3AP23-201ENST00000401762 784 ntBASIC4.16□□□□□ -1.74
SOX2P48431 Z97832.1-201ENST00000402490 328 ntBASIC4.16□□□□□ -1.74
SOX2P48431 Y_RNA.598-201ENST00000410480 95 ntBASIC4.16□□□□□ -1.74
SOX2P48431 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX2P48431 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX2P48431 USP9YP13-201ENST00000417797 480 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms