Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RN7SKP222-201ENST00000410651 315 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.72□□□□□ -1.81
SCN4AP35499 ELOCP23-201ENST00000452014 332 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.72□□□□□ -1.81
SCN4AP35499 RPL7P47-201ENST00000497299 556 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 HIGD1AP13-201ENST00000509878 289 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN4AP35499 AC025423.2-201ENST00000537570 439 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.72□□□□□ -1.81
SCN4AP35499 AL713998.2-201ENST00000604538 1198 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SCN4AP35499 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.72□□□□□ -1.81
SCN4AP35499 ELF2P3-201ENST00000445099 1506 ntBASIC3.71□□□□□ -1.81
SCN4AP35499 NEAT1-202ENST00000501122 22743 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 AC093311.1-201ENST00000506586 2021 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 AC073325.2-201ENST00000339545 159 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.71□□□□□ -1.82
SCN4AP35499 AL356968.1-201ENST00000416622 474 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 RPS26P47-201ENST00000427219 348 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.71□□□□□ -1.82
SCN4AP35499 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.71□□□□□ -1.82
SCN4AP35499 AC245517.2-201ENST00000442890 346 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.71□□□□□ -1.82
SCN4AP35499 FDX1P2-201ENST00000450769 375 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 AC006539.3-201ENST00000454258 129 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 AP002371.1-201ENST00000463604 433 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 AC114781.4-201ENST00000513707 639 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 RN7SKP5-201ENST00000517045 272 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.71□□□□□ -1.82
SCN4AP35499 AC009097.3-201ENST00000563557 1018 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 ADAM3B-201ENST00000569937 840 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 AP005212.4-201ENST00000614206 710 ntBASIC3.71□□□□□ -1.82
SCN4AP35499 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.71□□□□□ -1.82
SCN4AP35499 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SCN4AP35499 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
SCN4AP35499 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SCN4AP35499 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.71□□□□□ -1.82
SCN4AP35499 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SCN4AP35499 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCN4AP35499 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCN4AP35499 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.7□□□□□ -1.82
SCN4AP35499 AC022018.1-201ENST00000430685 241 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.7□□□□□ -1.82
SCN4AP35499 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.7□□□□□ -1.82
SCN4AP35499 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCN4AP35499 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.7□□□□□ -1.82
SCN4AP35499 AC022616.2-201ENST00000523185 300 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 AL109741.3-201ENST00000561748 592 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 AC106785.3-201ENST00000564064 847 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.7□□□□□ -1.82
SCN4AP35499 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN4AP35499 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCN4AP35499 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCN4AP35499 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN4AP35499 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SCN4AP35499 OR1S2-201ENST00000302592 978 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SCN4AP35499 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
SCN4AP35499 MIR22-201ENST00000362190 85 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.7□□□□□ -1.82
SCN4AP35499 AP002088.1-201ENST00000382740 395 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SCN4AP35499 RNA5SP293-201ENST00000410527 113 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 RNA5SP31-201ENST00000411144 127 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.7□□□□□ -1.82
SCN4AP35499 AC010468.1-201ENST00000461022 817 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 AC091544.1-201ENST00000484702 348 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.7□□□□□ -1.82
SCN4AP35499 AC114967.1-201ENST00000504890 259 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN4AP35499 IGKV2D-23-201ENST00000518179 286 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.7□□□□□ -1.82
SCN4AP35499 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN4AP35499 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN4AP35499 BMS1P7-201ENST00000602440 1052 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.7□□□□□ -1.82
SCN4AP35499 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SCN4AP35499 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SCN4AP35499 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCN4AP35499 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
SCN4AP35499 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
SCN4AP35499 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.69□□□□□ -1.82
SCN4AP35499 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SCN4AP35499 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCN4AP35499 SNORD15B-201ENST00000384714 146 ntBASIC3.69□□□□□ -1.82
SCN4AP35499 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.69□□□□□ -1.82
SCN4AP35499 AL645937.1-202ENST00000421799 937 ntBASIC3.69□□□□□ -1.82
SCN4AP35499 RPL21P40-201ENST00000428586 483 ntBASIC3.69□□□□□ -1.82
SCN4AP35499 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.69□□□□□ -1.82
SCN4AP35499 MTND4LP12-201ENST00000448237 295 ntBASIC3.69□□□□□ -1.82
SCN4AP35499 RNU7-157P-201ENST00000459600 66 ntBASIC3.69□□□□□ -1.82
SCN4AP35499 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.69□□□□□ -1.82
SCN4AP35499 AP001636.2-201ENST00000525517 696 ntBASIC3.69□□□□□ -1.82
SCN4AP35499 AC008126.1-201ENST00000549019 480 ntBASIC3.69□□□□□ -1.82
SCN4AP35499 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SCN4AP35499 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.69□□□□□ -1.82
SCN4AP35499 AC090971.4-201ENST00000560291 1800 ntBASIC3.69□□□□□ -1.82
SCN4AP35499 AF117829.1-206ENST00000621883 3802 ntBASIC3.68□□□□□ -1.82
SCN4AP35499 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SCN4AP35499 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms