Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AP000926.4-201ENST00000527351 454 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.5□□□□□ -1.85
SHMT2P34897 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.5□□□□□ -1.85
SHMT2P34897 AC023161.2-201ENST00000551218 780 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC027104.1-201ENST00000563702 681 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 MIR4425-201ENST00000580572 84 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC067852.4-201ENST00000590314 478 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.5□□□□□ -1.85
SHMT2P34897 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.5□□□□□ -1.85
SHMT2P34897 AC125494.3-201ENST00000602759 455 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 MIR7851-201ENST00000610611 160 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC024595.1-201ENST00000623088 387 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AP003355.3-201ENST00000623465 114 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SHMT2P34897 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.5□□□□□ -1.85
SHMT2P34897 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHMT2P34897 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SHMT2P34897 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.5□□□□□ -1.85
SHMT2P34897 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHMT2P34897 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.5□□□□□ -1.85
SHMT2P34897 USP8P1-201ENST00000494673 3183 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHMT2P34897 AC090337.1-201ENST00000579651 2074 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHMT2P34897 SNORA73.2-201ENST00000364946 201 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHMT2P34897 MIR449B-201ENST00000384995 97 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHMT2P34897 CYCSP4-201ENST00000429682 331 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.49□□□□□ -1.85
SHMT2P34897 HSPD1P21-201ENST00000436541 245 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.49□□□□□ -1.85
SHMT2P34897 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SHMT2P34897 AC044797.1-201ENST00000445744 679 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.49□□□□□ -1.85
SHMT2P34897 TVP23BP2-201ENST00000455082 615 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 AC104689.1-201ENST00000473356 768 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 AL049830.2-201ENST00000480072 201 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.49□□□□□ -1.85
SHMT2P34897 FCF1P3-201ENST00000496394 590 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.49□□□□□ -1.85
SHMT2P34897 OR5H4P-201ENST00000510851 923 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.49□□□□□ -1.85
SHMT2P34897 RN7SKP157-201ENST00000516174 282 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 RNU6-579P-201ENST00000516879 102 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 AC010306.1-201ENST00000523223 1117 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 IGKV2D-19-201ENST00000523346 262 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHMT2P34897 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.49□□□□□ -1.85
SHMT2P34897 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.49□□□□□ -1.85
SHMT2P34897 AP000919.1-202ENST00000581139 1264 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 AC006116.10-201ENST00000591836 581 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 AC006077.1-201ENST00000604746 343 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHMT2P34897 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.49□□□□□ -1.85
SHMT2P34897 AC009093.8-201ENST00000641769 292 ntBASIC3.49□□□□□ -1.85
SHMT2P34897 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.49□□□□□ -1.85
SHMT2P34897 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
SHMT2P34897 AC119744.1-201ENST00000454746 1715 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 AC007823.1-201ENST00000569932 1566 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHMT2P34897 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHMT2P34897 MIR16-2-201ENST00000362117 81 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 RNA5SP391-201ENST00000363456 119 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 AP002088.1-201ENST00000382740 395 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 RNU6-481P-201ENST00000384194 107 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SHMT2P34897 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHMT2P34897 PTMAP5-201ENST00000393073 333 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 AC092745.2-202ENST00000411880 369 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 RPS29P4-201ENST00000414733 161 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.48□□□□□ -1.85
SHMT2P34897 AC006989.1-201ENST00000427212 131 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 AC093422.3-201ENST00000428506 305 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.48□□□□□ -1.85
SHMT2P34897 FABP5P3-201ENST00000437960 408 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.48□□□□□ -1.85
SHMT2P34897 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.48□□□□□ -1.85
SHMT2P34897 VN1R34P-201ENST00000447387 883 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHMT2P34897 RPL7P55-201ENST00000450522 746 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 AL035407.2-201ENST00000454090 378 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 AL136097.1-201ENST00000456945 913 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 RN7SL330P-201ENST00000469709 307 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.48□□□□□ -1.85
SHMT2P34897 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.48□□□□□ -1.85
SHMT2P34897 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.48□□□□□ -1.85
SHMT2P34897 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.48□□□□□ -1.85
SHMT2P34897 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.48□□□□□ -1.85
SHMT2P34897 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.48□□□□□ -1.85
SHMT2P34897 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.48□□□□□ -1.85
SHMT2P34897 C1DP5-201ENST00000525775 383 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.48□□□□□ -1.85
SHMT2P34897 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.48□□□□□ -1.85
SHMT2P34897 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.48□□□□□ -1.85
SHMT2P34897 MIR3186-201ENST00000577404 85 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.48□□□□□ -1.85
SHMT2P34897 RPL21P136-201ENST00000605378 396 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 AC245100.7-201ENST00000609678 442 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 AC073569.3-201ENST00000619055 682 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms