Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CKS2P33552 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CKS2P33552 MAPK10-266ENST00000641066 6555 ntBASIC2.29□□□□□ -2.04
CKS2P33552 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CKS2P33552 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CKS2P33552 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CKS2P33552 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.28□□□□□ -2.04
CKS2P33552 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CKS2P33552 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CKS2P33552 RNU6-666P-201ENST00000363499 107 ntBASIC2.28□□□□□ -2.04
CKS2P33552 RNU1-13P-201ENST00000384499 162 ntBASIC2.28□□□□□ -2.04
CKS2P33552 AC110754.1-201ENST00000399740 601 ntBASIC2.28□□□□□ -2.04
CKS2P33552 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CKS2P33552 AL031121.1-201ENST00000406553 254 ntBASIC2.28□□□□□ -2.04
CKS2P33552 SMC4P1-201ENST00000414479 527 ntBASIC2.28□□□□□ -2.04
CKS2P33552 CRYBB2P1-203ENST00000415709 538 ntBASIC2.28□□□□□ -2.04
CKS2P33552 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.28□□□□□ -2.04
CKS2P33552 AL356806.1-201ENST00000422524 916 ntBASIC2.28□□□□□ -2.04
CKS2P33552 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.28□□□□□ -2.04
CKS2P33552 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.28□□□□□ -2.04
CKS2P33552 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.28□□□□□ -2.04
CKS2P33552 VDAC1P3-201ENST00000434069 851 ntBASIC2.28□□□□□ -2.04
CKS2P33552 SETP8-201ENST00000435341 628 ntBASIC2.28□□□□□ -2.04
CKS2P33552 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.28□□□□□ -2.04
CKS2P33552 AL031663.1-201ENST00000437445 219 ntBASIC2.28□□□□□ -2.04
CKS2P33552 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.28□□□□□ -2.04
CKS2P33552 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.28□□□□□ -2.04
CKS2P33552 AL157884.3-201ENST00000448273 1184 ntBASIC2.28□□□□□ -2.04
CKS2P33552 OR6C72P-201ENST00000451403 892 ntBASIC2.28□□□□□ -2.04
CKS2P33552 AC073387.1-201ENST00000453261 709 ntBASIC2.28□□□□□ -2.04
CKS2P33552 AC025518.1-201ENST00000479856 347 ntBASIC2.28□□□□□ -2.04
CKS2P33552 AC068724.1-201ENST00000487100 792 ntBASIC2.28□□□□□ -2.04
CKS2P33552 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.28□□□□□ -2.04
CKS2P33552 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CKS2P33552 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.28□□□□□ -2.04
CKS2P33552 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.28□□□□□ -2.04
CKS2P33552 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.28□□□□□ -2.04
CKS2P33552 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.28□□□□□ -2.04
CKS2P33552 AC103843.2-201ENST00000530523 682 ntBASIC2.28□□□□□ -2.04
CKS2P33552 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.28□□□□□ -2.04
CKS2P33552 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.28□□□□□ -2.04
CKS2P33552 MIR5685-201ENST00000579080 79 ntBASIC2.28□□□□□ -2.04
CKS2P33552 AC083760.1-201ENST00000589621 670 ntBASIC2.28□□□□□ -2.04
CKS2P33552 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.28□□□□□ -2.04
CKS2P33552 uc_338.25-201ENST00000613756 156 ntBASIC2.28□□□□□ -2.04
CKS2P33552 AC245389.2-201ENST00000616023 576 ntBASIC2.28□□□□□ -2.04
CKS2P33552 AC243756.2-201ENST00000618406 463 ntBASIC2.28□□□□□ -2.04
CKS2P33552 AC242843.1-201ENST00000618702 573 ntBASIC2.28□□□□□ -2.04
CKS2P33552 AL133370.2-201ENST00000619934 439 ntBASIC2.28□□□□□ -2.04
CKS2P33552 MAPK10-322ENST00000641485 4530 ntBASIC2.28□□□□□ -2.04
CKS2P33552 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CKS2P33552 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CKS2P33552 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CKS2P33552 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.28□□□□□ -2.05
CKS2P33552 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.27□□□□□ -2.05
CKS2P33552 AC004925.1-201ENST00000624256 2706 ntBASIC2.27□□□□□ -2.05
CKS2P33552 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CKS2P33552 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CKS2P33552 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.27□□□□□ -2.05
CKS2P33552 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CKS2P33552 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CKS2P33552 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.27□□□□□ -2.05
CKS2P33552 OR1S2-201ENST00000302592 978 ntBASIC2.27□□□□□ -2.05
CKS2P33552 RNA5SP391-201ENST00000363456 119 ntBASIC2.27□□□□□ -2.05
CKS2P33552 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.27□□□□□ -2.05
CKS2P33552 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.27□□□□□ -2.05
CKS2P33552 AL590290.1-201ENST00000405336 380 ntBASIC2.27□□□□□ -2.05
CKS2P33552 AL354719.1-201ENST00000406535 843 ntBASIC2.27□□□□□ -2.05
CKS2P33552 RPL5P18-201ENST00000406671 891 ntBASIC2.27□□□□□ -2.05
CKS2P33552 MRPL50P2-201ENST00000416821 482 ntBASIC2.27□□□□□ -2.05
CKS2P33552 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.27□□□□□ -2.05
CKS2P33552 TOMM22P1-201ENST00000418578 312 ntBASIC2.27□□□□□ -2.05
CKS2P33552 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.27□□□□□ -2.05
CKS2P33552 HSPE1P1-201ENST00000421494 318 ntBASIC2.27□□□□□ -2.05
CKS2P33552 RPL21P40-201ENST00000428586 483 ntBASIC2.27□□□□□ -2.05
CKS2P33552 CYCSP4-201ENST00000429682 331 ntBASIC2.27□□□□□ -2.05
CKS2P33552 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.27□□□□□ -2.05
CKS2P33552 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.27□□□□□ -2.05
CKS2P33552 RPL5P13-201ENST00000462840 709 ntBASIC2.27□□□□□ -2.05
CKS2P33552 PLGLA-201ENST00000465668 449 ntBASIC2.27□□□□□ -2.05
CKS2P33552 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.27□□□□□ -2.05
CKS2P33552 PRDX3P4-201ENST00000470828 747 ntBASIC2.27□□□□□ -2.05
CKS2P33552 RPL23AP11-201ENST00000475260 469 ntBASIC2.27□□□□□ -2.05
CKS2P33552 RPS27AP9-201ENST00000477681 438 ntBASIC2.27□□□□□ -2.05
CKS2P33552 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.27□□□□□ -2.05
CKS2P33552 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.27□□□□□ -2.05
CKS2P33552 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.27□□□□□ -2.05
CKS2P33552 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.27□□□□□ -2.05
CKS2P33552 IGKV2-26-201ENST00000518305 343 ntBASIC2.27□□□□□ -2.05
CKS2P33552 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.27□□□□□ -2.05
CKS2P33552 AF279873.1-201ENST00000523393 313 ntBASIC2.27□□□□□ -2.05
CKS2P33552 MTCYBP41-201ENST00000528913 1123 ntBASIC2.27□□□□□ -2.05
CKS2P33552 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.27□□□□□ -2.05
CKS2P33552 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.27□□□□□ -2.05
CKS2P33552 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.27□□□□□ -2.05
CKS2P33552 HIGD1AP1-201ENST00000550979 275 ntBASIC2.27□□□□□ -2.05
CKS2P33552 AC010653.1-201ENST00000571108 881 ntBASIC2.27□□□□□ -2.05
CKS2P33552 AC016252.1-201ENST00000609721 474 ntBASIC2.27□□□□□ -2.05
CKS2P33552 AL445423.1-201ENST00000609941 536 ntBASIC2.27□□□□□ -2.05
CKS2P33552 AC107871.2-201ENST00000612894 502 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms