Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.69□□□□□ -1.82
PTPN6P29350 USP9YP5-201ENST00000511770 630 ntBASIC3.69□□□□□ -1.82
PTPN6P29350 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.69□□□□□ -1.82
PTPN6P29350 AC119751.1-201ENST00000513357 765 ntBASIC3.69□□□□□ -1.82
PTPN6P29350 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTPN6P29350 NDUFA5P2-201ENST00000519723 344 ntBASIC3.69□□□□□ -1.82
PTPN6P29350 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.69□□□□□ -1.82
PTPN6P29350 AL133457.1-201ENST00000564251 987 ntBASIC3.69□□□□□ -1.82
PTPN6P29350 AC106785.1-201ENST00000565935 262 ntBASIC3.69□□□□□ -1.82
PTPN6P29350 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.69□□□□□ -1.82
PTPN6P29350 SNRPGP15-201ENST00000600149 222 ntBASIC3.69□□□□□ -1.82
PTPN6P29350 AC103710.3-201ENST00000608157 948 ntBASIC3.69□□□□□ -1.82
PTPN6P29350 AC090425.2-201ENST00000608818 501 ntBASIC3.69□□□□□ -1.82
PTPN6P29350 AC006023.2-201ENST00000609916 167 ntBASIC3.69□□□□□ -1.82
PTPN6P29350 AL591424.2-201ENST00000617023 128 ntBASIC3.69□□□□□ -1.82
PTPN6P29350 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.69□□□□□ -1.82
PTPN6P29350 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTPN6P29350 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.69□□□□□ -1.82
PTPN6P29350 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTPN6P29350 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTPN6P29350 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.69□□□□□ -1.82
PTPN6P29350 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.69□□□□□ -1.82
PTPN6P29350 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PTPN6P29350 AC000367.1-201ENST00000452711 1766 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN6P29350 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN6P29350 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.68□□□□□ -1.82
PTPN6P29350 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN6P29350 OTUD4P1-201ENST00000237841 3067 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AF127577.6-201ENST00000623352 2191 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 RNU6-353P-201ENST00000364266 108 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 HLFP1-201ENST00000402375 499 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 RNU4-6P-201ENST00000410804 122 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN6P29350 AC008280.1-201ENST00000418851 412 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN6P29350 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.68□□□□□ -1.82
PTPN6P29350 RANP8-201ENST00000444720 713 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 CDC27P1-201ENST00000445384 715 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPN6P29350 RPL21P104-201ENST00000464143 478 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 SNRPGP3-201ENST00000469405 227 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PTPN6P29350 AC084198.1-201ENST00000477747 402 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN6P29350 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN6P29350 AC004069.2-201ENST00000505438 1114 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN6P29350 FTH1P21-201ENST00000512179 511 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AC005798.1-201ENST00000513715 387 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN6P29350 MTND2P7-201ENST00000521337 640 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPN6P29350 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN6P29350 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN6P29350 AC092851.1-201ENST00000535964 478 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AC087894.1-201ENST00000538359 518 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AC091515.1-201ENST00000548110 679 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN6P29350 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN6P29350 AC010735.1-201ENST00000567305 1026 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AGGF1P6-201ENST00000569213 976 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AC110741.2-201ENST00000605278 268 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 VN1R74P-201ENST00000613259 503 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AC005156.1-201ENST00000613371 573 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN6P29350 AL161637.1-201ENST00000622380 412 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AC112200.1-201ENST00000625015 234 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN6P29350 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN6P29350 SGO1P1-201ENST00000603525 1447 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN6P29350 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PTPN6P29350 AL136520.1-201ENST00000600311 1322 ntBASIC3.68□□□□□ -1.82
PTPN6P29350 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN6P29350 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN6P29350 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN6P29350 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN6P29350 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN6P29350 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN6P29350 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PTPN6P29350 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN6P29350 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN6P29350 RNU5B-1-201ENST00000363286 116 ntBASIC3.67□□□□□ -1.82
PTPN6P29350 RNU6-335P-201ENST00000364563 113 ntBASIC3.67□□□□□ -1.82
PTPN6P29350 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN6P29350 RNU6-549P-201ENST00000384433 107 ntBASIC3.67□□□□□ -1.82
PTPN6P29350 MIR16-1-201ENST00000385271 89 ntBASIC3.67□□□□□ -1.82
PTPN6P29350 MIR199A2-201ENST00000385289 110 ntBASIC3.67□□□□□ -1.82
PTPN6P29350 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN6P29350 SFR1P1-201ENST00000403720 688 ntBASIC3.67□□□□□ -1.82
PTPN6P29350 UBE2V1P9-201ENST00000414760 368 ntBASIC3.67□□□□□ -1.82
PTPN6P29350 MTND2P16-201ENST00000419987 799 ntBASIC3.67□□□□□ -1.82
PTPN6P29350 OR8F1P-201ENST00000425243 930 ntBASIC3.67□□□□□ -1.82
PTPN6P29350 AL691449.1-201ENST00000426570 421 ntBASIC3.67□□□□□ -1.82
PTPN6P29350 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.67□□□□□ -1.82
PTPN6P29350 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.67□□□□□ -1.82
PTPN6P29350 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms