Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RPS6P15-201ENST00000431996 751 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.21□□□□□ -1.74
ABCD3P28288 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.21□□□□□ -1.74
ABCD3P28288 USP9YP7-201ENST00000436723 430 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 ARL4AP3-201ENST00000441452 574 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 HSPE1P28-201ENST00000443139 211 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 ARL2BPP10-201ENST00000446487 531 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 USP9YP32-201ENST00000452432 430 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 snoU109.4-201ENST00000458953 143 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 RN7SL738P-201ENST00000470264 297 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.21□□□□□ -1.74
ABCD3P28288 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.21□□□□□ -1.74
ABCD3P28288 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.21□□□□□ -1.74
ABCD3P28288 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.21□□□□□ -1.74
ABCD3P28288 AC111000.3-201ENST00000508057 576 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ABCD3P28288 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.21□□□□□ -1.74
ABCD3P28288 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.21□□□□□ -1.74
ABCD3P28288 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
ABCD3P28288 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.21□□□□□ -1.74
ABCD3P28288 DYNLL1P4-201ENST00000549314 266 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 CR383656.6-201ENST00000550518 394 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 EEF1B2P4-201ENST00000551398 348 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.21□□□□□ -1.74
ABCD3P28288 AC090888.2-201ENST00000559765 1144 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.21□□□□□ -1.74
ABCD3P28288 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.21□□□□□ -1.74
ABCD3P28288 MIR4330-201ENST00000579077 105 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 AC209154.1-201ENST00000582156 337 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 AC069061.3-201ENST00000582254 823 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ABCD3P28288 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.21□□□□□ -1.74
ABCD3P28288 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.21□□□□□ -1.74
ABCD3P28288 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.21□□□□□ -1.74
ABCD3P28288 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ABCD3P28288 AL133243.1-201ENST00000614487 366 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.21□□□□□ -1.74
ABCD3P28288 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.21□□□□□ -1.74
ABCD3P28288 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.21□□□□□ -1.74
ABCD3P28288 AC027287.1-201ENST00000553115 1453 ntBASIC4.21□□□□□ -1.74
ABCD3P28288 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.21□□□□□ -1.74
ABCD3P28288 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.21□□□□□ -1.74
ABCD3P28288 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
ABCD3P28288 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ABCD3P28288 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.21□□□□□ -1.74
ABCD3P28288 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.21□□□□□ -1.74
ABCD3P28288 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.21□□□□□ -1.74
ABCD3P28288 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ABCD3P28288 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ABCD3P28288 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ABCD3P28288 AC092435.4-201ENST00000623012 4159 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ABCD3P28288 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
ABCD3P28288 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ABCD3P28288 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
ABCD3P28288 RNU6-263P-201ENST00000363811 107 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.2□□□□□ -1.74
ABCD3P28288 AL031679.1-201ENST00000400616 525 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 DHFRP6-201ENST00000401776 268 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 RNU2-15P-201ENST00000410692 191 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 TPMTP2-201ENST00000414372 726 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.2□□□□□ -1.74
ABCD3P28288 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.2□□□□□ -1.74
ABCD3P28288 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ABCD3P28288 AC244098.2-201ENST00000422068 99 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 AC245028.1-201ENST00000423259 256 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 FAR2P4-202ENST00000425399 584 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 PSMA6P3-201ENST00000428242 164 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ABCD3P28288 MTATP6P17-201ENST00000431030 672 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 RPL7P34-201ENST00000433316 712 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 SNRPEP7-201ENST00000438350 220 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.2□□□□□ -1.74
ABCD3P28288 RPL23AP93-201ENST00000440847 484 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 MTCYBP3-201ENST00000445588 1137 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 HMGN2P21-201ENST00000447764 270 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.2□□□□□ -1.74
ABCD3P28288 DDX39BP2-208ENST00000453923 258 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 NDUFA12P1-201ENST00000455914 406 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 AC005008.1-201ENST00000456151 612 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 ATG12P2-201ENST00000456830 416 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 RNU7-136P-201ENST00000458819 69 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.2□□□□□ -1.74
ABCD3P28288 LINC00888-204ENST00000487386 421 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 DEFB109F-201ENST00000491870 277 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.2□□□□□ -1.74
ABCD3P28288 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.2□□□□□ -1.74
ABCD3P28288 AC104685.1-201ENST00000502445 371 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 STMN1P2-201ENST00000508435 439 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.2□□□□□ -1.74
ABCD3P28288 RNU6-1129P-201ENST00000515964 104 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 RNU6-150P-201ENST00000516237 95 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 RN7SKP92-201ENST00000517266 244 ntBASIC4.2□□□□□ -1.74
ABCD3P28288 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.2□□□□□ -1.74
ABCD3P28288 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.2□□□□□ -1.74
ABCD3P28288 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.2□□□□□ -1.74
ABCD3P28288 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.2□□□□□ -1.74
ABCD3P28288 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.2□□□□□ -1.74
ABCD3P28288 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.2□□□□□ -1.74
ABCD3P28288 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms