Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC6.82□□□□□ -1.32
COL9A1P20849 AP000560.1-201ENST00000624150 1937 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
COL9A1P20849 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 LINC02035-201ENST00000610128 5476 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.81□□□□□ -1.32
COL9A1P20849 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
COL9A1P20849 MAPK10-261ENST00000641050 3109 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
COL9A1P20849 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC6.81□□□□□ -1.32
COL9A1P20849 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 AC138393.1-203ENST00000327086 343 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 SNORA70.3-201ENST00000365075 132 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
COL9A1P20849 SMIM11P1-201ENST00000369586 178 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 RNU6-1154P-201ENST00000391001 104 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.81□□□□□ -1.32
COL9A1P20849 RN7SKP159-201ENST00000410657 292 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 BX842559.1-201ENST00000419615 532 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.81□□□□□ -1.32
COL9A1P20849 RPS6P12-201ENST00000432491 726 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.81□□□□□ -1.32
COL9A1P20849 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.81□□□□□ -1.32
COL9A1P20849 AL359273.1-201ENST00000510918 627 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC6.81□□□□□ -1.32
COL9A1P20849 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.81□□□□□ -1.32
COL9A1P20849 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.81□□□□□ -1.32
COL9A1P20849 MRPS21P8-201ENST00000569196 235 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 MIR4643-201ENST00000577473 78 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 AL589994.2-201ENST00000621124 579 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.81□□□□□ -1.32
COL9A1P20849 U6.106-201ENST00000636360 105 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.81□□□□□ -1.32
COL9A1P20849 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.81□□□□□ -1.32
COL9A1P20849 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.81□□□□□ -1.32
COL9A1P20849 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 Z75746.1-201ENST00000440243 2080 ntBASIC6.81□□□□□ -1.32
COL9A1P20849 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
COL9A1P20849 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
COL9A1P20849 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.81□□□□□ -1.32
COL9A1P20849 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL9A1P20849 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL9A1P20849 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL9A1P20849 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.8□□□□□ -1.32
COL9A1P20849 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.8□□□□□ -1.32
COL9A1P20849 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL9A1P20849 AC104581.5-201ENST00000624171 7141 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL9A1P20849 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL9A1P20849 AC087501.5-201ENST00000607496 2374 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
COL9A1P20849 RNU6-1020P-201ENST00000363684 107 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.8□□□□□ -1.32
COL9A1P20849 RNU6-1226P-201ENST00000384317 107 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 RNU6-729P-201ENST00000384399 107 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 U3.43-201ENST00000410734 213 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 Y_RNA.629-201ENST00000411368 105 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 AC016397.1-201ENST00000412463 242 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 FAR2P2-201ENST00000413041 594 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.8□□□□□ -1.32
COL9A1P20849 AL354766.1-201ENST00000423396 542 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL9A1P20849 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
COL9A1P20849 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.8□□□□□ -1.32
COL9A1P20849 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.8□□□□□ -1.32
COL9A1P20849 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.8□□□□□ -1.32
COL9A1P20849 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.8□□□□□ -1.32
COL9A1P20849 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC6.8□□□□□ -1.32
COL9A1P20849 RPL7AP23-201ENST00000482625 776 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 RPL12P30-201ENST00000488389 499 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 AC063943.2-201ENST00000495697 534 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 AC135721.1-201ENST00000497954 479 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 AC055733.3-201ENST00000505214 523 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 COX7A2P2-201ENST00000505291 250 ntBASIC6.8□□□□□ -1.32
COL9A1P20849 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL9A1P20849 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.8□□□□□ -1.32
COL9A1P20849 AC004024.1-201ENST00000549244 247 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms