Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGA1P17096 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGA1P17096 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGA1P17096 RPS27AP18-201ENST00000515536 459 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 AC135001.1-201ENST00000544546 283 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGA1P17096 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGA1P17096 AC138761.3-201ENST00000579993 334 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 VN1R90P-201ENST00000595717 726 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 AL390838.2-201ENST00000602394 274 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 RPL12P50-201ENST00000603116 116 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGA1P17096 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGA1P17096 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGA1P17096 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGA1P17096 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGA1P17096 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3□□□□□ -1.93
HMGA1P17096 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3□□□□□ -1.93
HMGA1P17096 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
HMGA1P17096 TANK-206ENST00000406287 875 ntTSL 5 BASIC3□□□□□ -1.93
HMGA1P17096 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3□□□□□ -1.93
HMGA1P17096 AL139281.1-201ENST00000422120 335 ntBASIC3□□□□□ -1.93
HMGA1P17096 AC087499.2-201ENST00000432861 149 ntBASIC3□□□□□ -1.93
HMGA1P17096 RPS20P5-201ENST00000434808 360 ntBASIC3□□□□□ -1.93
HMGA1P17096 AL357520.1-201ENST00000441557 453 ntBASIC3□□□□□ -1.93
HMGA1P17096 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3□□□□□ -1.93
HMGA1P17096 RPL29P29-201ENST00000448725 423 ntBASIC3□□□□□ -1.93
HMGA1P17096 AC125238.1-201ENST00000448842 249 ntBASIC3□□□□□ -1.93
HMGA1P17096 AL162388.1-201ENST00000450912 352 ntBASIC3□□□□□ -1.93
HMGA1P17096 NIPA2P5-201ENST00000452282 464 ntBASIC3□□□□□ -1.93
HMGA1P17096 RFPL4AP3-201ENST00000515267 345 ntBASIC3□□□□□ -1.93
HMGA1P17096 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3□□□□□ -1.93
HMGA1P17096 IGHVII-62-1-201ENST00000519283 235 ntBASIC3□□□□□ -1.93
HMGA1P17096 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3□□□□□ -1.93
HMGA1P17096 COX6CP8-201ENST00000522620 226 ntBASIC3□□□□□ -1.93
HMGA1P17096 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3□□□□□ -1.93
HMGA1P17096 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGA1P17096 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3□□□□□ -1.93
HMGA1P17096 AC022509.4-201ENST00000621404 572 ntBASIC3□□□□□ -1.93
HMGA1P17096 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
HMGA1P17096 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
HMGA1P17096 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3□□□□□ -1.93
HMGA1P17096 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HMGA1P17096 RNU6-984P-201ENST00000363236 109 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HMGA1P17096 RPL31P1-201ENST00000398116 372 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 AL592148.1-201ENST00000413568 445 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 RPL23AP4-201ENST00000427757 463 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGA1P17096 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HMGA1P17096 AP001025.2-201ENST00000490908 477 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 AC069306.1-201ENST00000507006 843 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGA1P17096 IGKV2D-23-201ENST00000518179 286 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGA1P17096 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.99□□□□□ -1.93
HMGA1P17096 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.99□□□□□ -1.93
HMGA1P17096 MIR4319-201ENST00000577285 85 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 MIR5047-201ENST00000579212 100 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 MIR4513-201ENST00000581077 86 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 MIR3162-201ENST00000581818 82 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HMGA1P17096 RNU6-84P-201ENST00000607737 102 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 AC008121.2-201ENST00000614647 523 ntBASIC2.99□□□□□ -1.93
HMGA1P17096 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGA1P17096 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.99□□□□□ -1.93
HMGA1P17096 MTCO1P8-201ENST00000416914 1523 ntBASIC2.98□□□□□ -1.93
HMGA1P17096 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
HMGA1P17096 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA1P17096 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA1P17096 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA1P17096 AC062016.1-201ENST00000355719 319 ntBASIC2.98□□□□□ -1.93
HMGA1P17096 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HMGA1P17096 ARF4P3-201ENST00000397387 509 ntBASIC2.98□□□□□ -1.93
HMGA1P17096 AC245054.2-201ENST00000415639 319 ntBASIC2.98□□□□□ -1.93
HMGA1P17096 AC073508.1-201ENST00000428866 656 ntBASIC2.98□□□□□ -1.93
HMGA1P17096 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.98□□□□□ -1.93
HMGA1P17096 HMGB3P8-201ENST00000449709 577 ntBASIC2.98□□□□□ -1.93
HMGA1P17096 AL109741.3-201ENST00000561748 592 ntBASIC2.98□□□□□ -1.93
HMGA1P17096 AC007390.2-201ENST00000606229 3803 ntBASIC2.98□□□□□ -1.93
HMGA1P17096 AC107294.3-201ENST00000609211 526 ntBASIC2.98□□□□□ -1.93
HMGA1P17096 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC2.98□□□□□ -1.93
HMGA1P17096 AP003485.2-201ENST00000623636 610 ntBASIC2.98□□□□□ -1.93
HMGA1P17096 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HMGA1P17096 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA1P17096 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA1P17096 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HMGA1P17096 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HMGA1P17096 AC004972.1-201ENST00000623934 2209 ntBASIC2.97□□□□□ -1.93
HMGA1P17096 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.97□□□□□ -1.93
HMGA1P17096 NUP35P1-201ENST00000422734 947 ntBASIC2.97□□□□□ -1.93
HMGA1P17096 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.97□□□□□ -1.93
HMGA1P17096 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC2.97□□□□□ -1.93
HMGA1P17096 AC018797.3-201ENST00000513388 1241 ntBASIC2.97□□□□□ -1.93
HMGA1P17096 AC068657.1-201ENST00000520807 306 ntBASIC2.97□□□□□ -1.93
HMGA1P17096 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.97□□□□□ -1.93
HMGA1P17096 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.97□□□□□ -1.93
HMGA1P17096 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms