Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.06□□□□□ -1.76
TOP1P11387 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.06□□□□□ -1.76
TOP1P11387 RPL23AP33-201ENST00000442301 452 ntBASIC4.06□□□□□ -1.76
TOP1P11387 AC008155.2-201ENST00000464337 397 ntBASIC4.06□□□□□ -1.76
TOP1P11387 WBP1LP4-201ENST00000505043 344 ntBASIC4.06□□□□□ -1.76
TOP1P11387 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.06□□□□□ -1.76
TOP1P11387 AC108157.1-201ENST00000510511 539 ntBASIC4.06□□□□□ -1.76
TOP1P11387 RN7SKP60-201ENST00000516985 239 ntBASIC4.06□□□□□ -1.76
TOP1P11387 AC026333.2-201ENST00000542164 106 ntBASIC4.06□□□□□ -1.76
TOP1P11387 DUXAP6-201ENST00000553858 601 ntBASIC4.06□□□□□ -1.76
TOP1P11387 AC090751.1-201ENST00000566966 267 ntBASIC4.06□□□□□ -1.76
TOP1P11387 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.06□□□□□ -1.76
TOP1P11387 RN7SL339P-201ENST00000580597 296 ntBASIC4.06□□□□□ -1.76
TOP1P11387 AC005412.1-201ENST00000580812 1049 ntBASIC4.06□□□□□ -1.76
TOP1P11387 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.06□□□□□ -1.76
TOP1P11387 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.06□□□□□ -1.76
TOP1P11387 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
TOP1P11387 RMST_8.1-201ENST00000610287 165 ntBASIC4.06□□□□□ -1.76
TOP1P11387 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.06□□□□□ -1.76
TOP1P11387 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TOP1P11387 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TOP1P11387 AC068647.1-201ENST00000489539 2265 ntBASIC4.06□□□□□ -1.76
TOP1P11387 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.06□□□□□ -1.76
TOP1P11387 AL645937.1-201ENST00000641739 1652 ntBASIC4.06□□□□□ -1.76
TOP1P11387 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TOP1P11387 AL157700.1-201ENST00000561973 1432 ntBASIC4.05□□□□□ -1.76
TOP1P11387 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP1P11387 SEPT7P7-201ENST00000420492 1301 ntBASIC4.05□□□□□ -1.76
TOP1P11387 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP1P11387 RNA5SP72-201ENST00000364442 117 ntBASIC4.05□□□□□ -1.76
TOP1P11387 RNA5SP235-201ENST00000365411 114 ntBASIC4.05□□□□□ -1.76
TOP1P11387 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP1P11387 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP1P11387 OR6K3-202ENST00000368146 996 ntBASIC4.05□□□□□ -1.76
TOP1P11387 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.05□□□□□ -1.76
TOP1P11387 NUP35P2-201ENST00000416748 943 ntBASIC4.05□□□□□ -1.76
TOP1P11387 OSTCP5-201ENST00000425293 453 ntBASIC4.05□□□□□ -1.76
TOP1P11387 AL158071.1-201ENST00000430315 461 ntBASIC4.05□□□□□ -1.76
TOP1P11387 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.05□□□□□ -1.76
TOP1P11387 ACTG1P13-201ENST00000486987 1043 ntBASIC4.05□□□□□ -1.76
TOP1P11387 OR52A4P-203ENST00000498233 1014 ntBASIC4.05□□□□□ -1.76
TOP1P11387 RNU6-362P-201ENST00000516736 90 ntBASIC4.05□□□□□ -1.76
TOP1P11387 IGKV2-26-201ENST00000518305 343 ntBASIC4.05□□□□□ -1.76
TOP1P11387 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.05□□□□□ -1.76
TOP1P11387 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.05□□□□□ -1.76
TOP1P11387 AL139174.1-201ENST00000531489 886 ntBASIC4.05□□□□□ -1.76
TOP1P11387 OR5D17P-201ENST00000531492 978 ntBASIC4.05□□□□□ -1.76
TOP1P11387 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.05□□□□□ -1.76
TOP1P11387 ZNF192P1-203ENST00000565888 810 ntBASIC4.05□□□□□ -1.76
TOP1P11387 BNIP3P22-201ENST00000593399 556 ntBASIC4.05□□□□□ -1.76
TOP1P11387 SRGNP1-201ENST00000603392 451 ntBASIC4.05□□□□□ -1.76
TOP1P11387 AL365503.1-201ENST00000605247 905 ntBASIC4.05□□□□□ -1.76
TOP1P11387 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.05□□□□□ -1.76
TOP1P11387 LINC00216-201ENST00000623548 1126 ntBASIC4.05□□□□□ -1.76
TOP1P11387 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP1P11387 AL592494.2-201ENST00000425455 1548 ntBASIC4.05□□□□□ -1.76
TOP1P11387 HSPA8P19-201ENST00000505359 1517 ntBASIC4.05□□□□□ -1.76
TOP1P11387 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TOP1P11387 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP1P11387 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.04□□□□□ -1.76
TOP1P11387 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.04□□□□□ -1.76
TOP1P11387 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TOP1P11387 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TOP1P11387 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
TOP1P11387 RNU6-98P-201ENST00000384173 107 ntBASIC4.04□□□□□ -1.76
TOP1P11387 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.04□□□□□ -1.76
TOP1P11387 AC241520.1-201ENST00000422654 1099 ntBASIC4.04□□□□□ -1.76
TOP1P11387 AC017083.1-201ENST00000428093 483 ntBASIC4.04□□□□□ -1.76
TOP1P11387 AC006946.1-201ENST00000429106 328 ntBASIC4.04□□□□□ -1.76
TOP1P11387 MRPS31P2-201ENST00000451581 518 ntBASIC4.04□□□□□ -1.76
TOP1P11387 AC007967.1-201ENST00000455422 1159 ntBASIC4.04□□□□□ -1.76
TOP1P11387 snoU13.22-201ENST00000459428 104 ntBASIC4.04□□□□□ -1.76
TOP1P11387 AC091153.1-201ENST00000466297 402 ntBASIC4.04□□□□□ -1.76
TOP1P11387 SNRPGP3-201ENST00000469405 227 ntBASIC4.04□□□□□ -1.76
TOP1P11387 AC104689.1-201ENST00000473356 768 ntBASIC4.04□□□□□ -1.76
TOP1P11387 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TOP1P11387 FCF1P3-201ENST00000496394 590 ntBASIC4.04□□□□□ -1.76
TOP1P11387 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TOP1P11387 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.04□□□□□ -1.76
TOP1P11387 RN7SKP277-201ENST00000516895 283 ntBASIC4.04□□□□□ -1.76
TOP1P11387 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.04□□□□□ -1.76
TOP1P11387 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.04□□□□□ -1.76
TOP1P11387 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.04□□□□□ -1.76
TOP1P11387 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.04□□□□□ -1.76
TOP1P11387 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TOP1P11387 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.04□□□□□ -1.76
TOP1P11387 AC103710.3-201ENST00000608157 948 ntBASIC4.04□□□□□ -1.76
TOP1P11387 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TOP1P11387 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TOP1P11387 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TOP1P11387 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.03□□□□□ -1.76
TOP1P11387 AL356274.2-201ENST00000624379 3752 ntBASIC4.03□□□□□ -1.76
TOP1P11387 MTCO1P24-201ENST00000515438 1558 ntBASIC4.03□□□□□ -1.76
TOP1P11387 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TOP1P11387 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TOP1P11387 SNORA70.4-201ENST00000365509 134 ntBASIC4.03□□□□□ -1.76
TOP1P11387 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.03□□□□□ -1.76
TOP1P11387 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TOP1P11387 RSL24D1P1-201ENST00000404972 493 ntBASIC4.03□□□□□ -1.76
TOP1P11387 MTATP6P31-201ENST00000406985 692 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms