Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SLC31A1P1-201ENST00000451221 567 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
UBCP0CG48 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.21□□□□□ -1.9
UBCP0CG48 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.21□□□□□ -1.9
UBCP0CG48 OR9M1P-201ENST00000459641 921 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 MTCO3P35-201ENST00000485582 781 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 RPS3AP50-201ENST00000487064 803 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 AC093267.1-201ENST00000489176 961 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 HMGB1P22-201ENST00000505315 124 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.21□□□□□ -1.9
UBCP0CG48 FTH1P21-201ENST00000512179 511 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 RNU6-202P-201ENST00000515998 96 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 RN7SKP116-201ENST00000516902 319 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 IGKV2D-36-201ENST00000518643 226 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.21□□□□□ -1.9
UBCP0CG48 AC109635.4-202ENST00000531666 412 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.21□□□□□ -1.9
UBCP0CG48 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.21□□□□□ -1.9
UBCP0CG48 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.21□□□□□ -1.9
UBCP0CG48 CYCSP30-201ENST00000546447 172 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 AC011602.1-201ENST00000546484 331 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBCP0CG48 TGIF1P1-201ENST00000558095 802 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 ATP5F1P7-201ENST00000567330 760 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.21□□□□□ -1.9
UBCP0CG48 AL445423.1-201ENST00000609941 536 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.21□□□□□ -1.9
UBCP0CG48 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
UBCP0CG48 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.21□□□□□ -1.9
UBCP0CG48 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 AL732618.1-201ENST00000623251 301 ntBASIC3.21□□□□□ -1.9
UBCP0CG48 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.21□□□□□ -1.9
UBCP0CG48 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
UBCP0CG48 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBCP0CG48 AC058791.1-201ENST00000608412 3198 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBCP0CG48 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBCP0CG48 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.2□□□□□ -1.9
UBCP0CG48 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
UBCP0CG48 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.2□□□□□ -1.9
UBCP0CG48 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
UBCP0CG48 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBCP0CG48 OR5T3-201ENST00000303059 1023 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBCP0CG48 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBCP0CG48 RNU6-213P-201ENST00000384051 104 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RNU6-629P-201ENST00000384061 103 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RNU6-1181P-201ENST00000384191 106 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RNU6-1005P-201ENST00000384519 107 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RNU6-837P-201ENST00000391056 108 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 SSXP10-201ENST00000402595 565 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RPL23AP47-201ENST00000408017 460 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RNA5SP317-201ENST00000410176 116 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RNU6-55P-201ENST00000411092 107 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RNA5SP311-201ENST00000411290 116 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RNU6-954P-201ENST00000411355 107 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.2□□□□□ -1.9
UBCP0CG48 AC114755.5-201ENST00000447760 831 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RPL12P26-201ENST00000452430 487 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 BX248409.1-201ENST00000455497 255 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.2□□□□□ -1.9
UBCP0CG48 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.2□□□□□ -1.9
UBCP0CG48 AC022034.3-201ENST00000471393 478 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 AC087312.1-201ENST00000471411 480 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 ACTG1P13-201ENST00000486987 1043 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RPS27P23-201ENST00000487608 251 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 TPT1P3-201ENST00000492841 512 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RN7SL323P-201ENST00000494712 295 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.2□□□□□ -1.9
UBCP0CG48 AC133963.2-201ENST00000513686 578 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 AC104057.1-201ENST00000515547 497 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RNA5SP315-201ENST00000516340 116 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RNA5SP312-201ENST00000517068 116 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 RPL12P22-201ENST00000519073 490 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.2□□□□□ -1.9
UBCP0CG48 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.2□□□□□ -1.9
UBCP0CG48 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBCP0CG48 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.2□□□□□ -1.9
UBCP0CG48 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.2□□□□□ -1.9
UBCP0CG48 AC012182.1-201ENST00000570133 895 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.2□□□□□ -1.9
UBCP0CG48 AL606490.9-201ENST00000603331 271 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.2□□□□□ -1.9
UBCP0CG48 AL590282.1-201ENST00000610379 1136 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBCP0CG48 AC073569.3-201ENST00000619055 682 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 AC068620.4-201ENST00000636730 1182 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
UBCP0CG48 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBCP0CG48 ZNF826P-207ENST00000622273 1910 ntBASIC3.2□□□□□ -1.9
UBCP0CG48 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBCP0CG48 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBCP0CG48 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBCP0CG48 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.2□□□□□ -1.9
UBCP0CG48 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.2□□□□□ -1.9
UBCP0CG48 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBCP0CG48 AL672296.1-201ENST00000427780 2158 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 ZNF734P-201ENST00000419494 1534 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AC007256.1-201ENST00000392253 2765 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms