Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PTP4A1P5-201ENST00000420305 455 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 AL451062.2-201ENST00000427515 271 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 OR6C71P-201ENST00000432580 913 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 TXNP1-201ENST00000441872 371 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 HMGB3P6-201ENST00000444896 598 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 AC125238.1-201ENST00000448842 249 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 RN7SKP289-201ENST00000517244 295 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 PDCL2P2-201ENST00000533651 189 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 AL161713.1-201ENST00000555538 145 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 MIR5047-201ENST00000579212 100 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 MIR3944-201ENST00000581277 108 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 AC119674.1-212ENST00000641155 993 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DQB2P05538 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DQB2P05538 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
HLA-DQB2P05538 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
HLA-DQB2P05538 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 U3.6-201ENST00000363622 211 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 SNORD6-201ENST00000365444 73 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 OR52E6-202ENST00000379946 954 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 RNU6-328P-201ENST00000390887 106 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AC110754.1-201ENST00000399740 601 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 RPS15AP6-201ENST00000420703 385 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AC011242.1-201ENST00000433596 1158 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AL606490.8-201ENST00000441624 319 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AC016696.1-201ENST00000446949 318 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 RPL23AP62-201ENST00000463396 453 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 RN7SL807P-201ENST00000470923 297 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 SLC25A15P5-201ENST00000508033 253 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 MIR5004-201ENST00000579078 107 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AC005242.1-201ENST00000585658 438 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AC099506.2-201ENST00000623074 221 ntBASIC3.15□□□□□ -1.91
HLA-DQB2P05538 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQB2P05538 AL592494.2-201ENST00000425455 1548 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 MIR208A-201ENST00000362287 71 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 SNORD46.1-201ENST00000364139 104 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC007899.1-201ENST00000412776 775 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC013404.1-201ENST00000413068 249 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 RPL23AP69-201ENST00000431134 458 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC006445.1-201ENST00000491925 405 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC114967.1-201ENST00000504890 259 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC022884.3-201ENST00000579571 248 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC079880.2-201ENST00000603790 1213 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC007179.3-201ENST00000604976 235 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 YPEL5P2-201ENST00000605553 359 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC139769.3-201ENST00000618383 175 ntBASIC3.14□□□□□ -1.91
HLA-DQB2P05538 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HLA-DQB2P05538 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms