Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC018797.3-201ENST00000513388 1241 ntBASIC1.81□□□□□ -2.12
APOBP04114 AL390334.1-201ENST00000556395 450 ntBASIC1.81□□□□□ -2.12
APOBP04114 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.81□□□□□ -2.12
APOBP04114 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
APOBP04114 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
APOBP04114 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
APOBP04114 HMGB3P6-201ENST00000444896 598 ntBASIC1.81□□□□□ -2.12
APOBP04114 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC1.81□□□□□ -2.12
APOBP04114 RN7SL442P-201ENST00000473804 320 ntBASIC1.81□□□□□ -2.12
APOBP04114 AC025181.1-201ENST00000477507 416 ntBASIC1.81□□□□□ -2.12
APOBP04114 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
APOBP04114 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.81□□□□□ -2.12
APOBP04114 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.81□□□□□ -2.12
APOBP04114 AC078899.3-201ENST00000599065 212 ntBASIC1.81□□□□□ -2.12
APOBP04114 AL592295.2-201ENST00000612578 206 ntBASIC1.81□□□□□ -2.12
APOBP04114 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.81□□□□□ -2.12
APOBP04114 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
APOBP04114 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC1.81□□□□□ -2.12
APOBP04114 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.81□□□□□ -2.12
APOBP04114 THAP12P8-201ENST00000447914 2115 ntBASIC1.81□□□□□ -2.12
APOBP04114 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
APOBP04114 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
APOBP04114 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC1.81□□□□□ -2.12
APOBP04114 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC1.81□□□□□ -2.12
APOBP04114 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.81□□□□□ -2.12
APOBP04114 AC105402.1-201ENST00000413336 545 ntBASIC1.81□□□□□ -2.12
APOBP04114 AC006989.1-201ENST00000427212 131 ntBASIC1.81□□□□□ -2.12
APOBP04114 B3GNT2P1-201ENST00000434960 952 ntBASIC1.81□□□□□ -2.12
APOBP04114 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC1.81□□□□□ -2.12
APOBP04114 UBE2V2P4-201ENST00000447495 259 ntBASIC1.81□□□□□ -2.12
APOBP04114 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.81□□□□□ -2.12
APOBP04114 TCP11X3P-202ENST00000514289 1254 ntBASIC1.81□□□□□ -2.12
APOBP04114 AP000859.1-201ENST00000525536 307 ntBASIC1.81□□□□□ -2.12
APOBP04114 AP001004.1-201ENST00000582468 324 ntBASIC1.81□□□□□ -2.12
APOBP04114 AC103810.6-201ENST00000606708 136 ntBASIC1.81□□□□□ -2.12
APOBP04114 AC009237.17-201ENST00000618111 748 ntBASIC1.81□□□□□ -2.12
APOBP04114 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
APOBP04114 AC020633.1-201ENST00000468439 2247 ntBASIC1.81□□□□□ -2.12
APOBP04114 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC1.81□□□□□ -2.12
APOBP04114 RNU1-112P-201ENST00000364401 164 ntBASIC1.81□□□□□ -2.12
APOBP04114 AC110754.1-201ENST00000399740 601 ntBASIC1.81□□□□□ -2.12
APOBP04114 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.81□□□□□ -2.12
APOBP04114 MTCO3P16-201ENST00000454456 754 ntBASIC1.81□□□□□ -2.12
APOBP04114 PRDX3P4-201ENST00000470828 747 ntBASIC1.81□□□□□ -2.12
APOBP04114 GAPDHP39-201ENST00000481866 979 ntBASIC1.81□□□□□ -2.12
APOBP04114 AC090281.1-201ENST00000523019 276 ntBASIC1.81□□□□□ -2.12
APOBP04114 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC1.81□□□□□ -2.12
APOBP04114 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC1.81□□□□□ -2.12
APOBP04114 AC079298.2-201ENST00000623885 459 ntBASIC1.81□□□□□ -2.12
APOBP04114 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
APOBP04114 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC1.8□□□□□ -2.12
APOBP04114 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
APOBP04114 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.8□□□□□ -2.12
APOBP04114 RPL23AP31-201ENST00000456160 467 ntBASIC1.8□□□□□ -2.12
APOBP04114 AP003102.1-201ENST00000525638 661 ntBASIC1.8□□□□□ -2.12
APOBP04114 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC1.8□□□□□ -2.12
APOBP04114 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.8□□□□□ -2.12
APOBP04114 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 AC017007.4-201ENST00000503353 1352 ntBASIC1.8□□□□□ -2.12
APOBP04114 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 SNORA9.2-201ENST00000365361 133 ntBASIC1.8□□□□□ -2.12
APOBP04114 SNORA3.2-201ENST00000408221 125 ntBASIC1.8□□□□□ -2.12
APOBP04114 UBE2D3P1-201ENST00000436669 444 ntBASIC1.8□□□□□ -2.12
APOBP04114 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC1.8□□□□□ -2.12
APOBP04114 NIPA2P5-201ENST00000452282 464 ntBASIC1.8□□□□□ -2.12
APOBP04114 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC1.8□□□□□ -2.12
APOBP04114 AC022795.1-201ENST00000473808 480 ntBASIC1.8□□□□□ -2.12
APOBP04114 RPS4XP22-201ENST00000480755 780 ntBASIC1.8□□□□□ -2.12
APOBP04114 AC243972.3-201ENST00000539655 198 ntBASIC1.8□□□□□ -2.12
APOBP04114 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.8□□□□□ -2.12
APOBP04114 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.8□□□□□ -2.12
APOBP04114 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 IDE-202ENST00000371581 4480 ntTSL 2 BASIC1.8□□□□□ -2.12
APOBP04114 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC1.8□□□□□ -2.12
APOBP04114 AC087499.2-201ENST00000432861 149 ntBASIC1.8□□□□□ -2.12
APOBP04114 RPL23AP22-201ENST00000437556 453 ntBASIC1.8□□□□□ -2.12
APOBP04114 AC011816.1-201ENST00000441346 546 ntBASIC1.8□□□□□ -2.12
APOBP04114 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.8□□□□□ -2.12
APOBP04114 AC133134.1-201ENST00000466800 359 ntBASIC1.8□□□□□ -2.12
APOBP04114 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC1.8□□□□□ -2.12
APOBP04114 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC1.8□□□□□ -2.12
APOBP04114 AC141257.3-201ENST00000572906 215 ntBASIC1.8□□□□□ -2.12
APOBP04114 AC073476.4-201ENST00000628409 72 ntBASIC1.8□□□□□ -2.12
APOBP04114 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
APOBP04114 MIR518C-201ENST00000384822 101 ntBASIC1.79□□□□□ -2.12
APOBP04114 RAP1BP1-201ENST00000412709 553 ntBASIC1.79□□□□□ -2.12
APOBP04114 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.79□□□□□ -2.12
APOBP04114 AL591806.2-201ENST00000433122 173 ntBASIC1.79□□□□□ -2.12
APOBP04114 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
APOBP04114 RPS6P4-201ENST00000494693 758 ntBASIC1.79□□□□□ -2.12
APOBP04114 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms