Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.68□□□□□ -1.98
SDCBPO00560 RNU6-319P-201ENST00000516025 108 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.68□□□□□ -1.98
SDCBPO00560 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.68□□□□□ -1.98
SDCBPO00560 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.68□□□□□ -1.98
SDCBPO00560 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.68□□□□□ -1.98
SDCBPO00560 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.68□□□□□ -1.98
SDCBPO00560 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.68□□□□□ -1.98
SDCBPO00560 AC115989.2-201ENST00000578640 563 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.68□□□□□ -1.98
SDCBPO00560 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.68□□□□□ -1.98
SDCBPO00560 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.68□□□□□ -1.98
SDCBPO00560 AC073657.2-201ENST00000605661 303 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 AC012557.1-201ENST00000607115 611 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 AP005212.4-201ENST00000614206 710 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.68□□□□□ -1.98
SDCBPO00560 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.68□□□□□ -1.98
SDCBPO00560 SNORA50A-202ENST00000629536 136 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SDCBPO00560 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.68□□□□□ -1.98
SDCBPO00560 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.67□□□□□ -1.98
SDCBPO00560 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SDCBPO00560 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SDCBPO00560 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.67□□□□□ -1.98
SDCBPO00560 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SDCBPO00560 AL133383.2-201ENST00000622958 2336 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SDCBPO00560 RNU6-1251P-201ENST00000364502 107 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 MIR490-201ENST00000384865 128 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 GSTA12P-201ENST00000402398 508 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 HMGN1P24-201ENST00000412282 298 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 RPS7P15-201ENST00000415804 584 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 MTND4P11-201ENST00000417020 1058 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.67□□□□□ -1.98
SDCBPO00560 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.67□□□□□ -1.98
SDCBPO00560 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SDCBPO00560 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.67□□□□□ -1.98
SDCBPO00560 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
SDCBPO00560 MTCO1P52-201ENST00000433928 531 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 MTCYBP29-201ENST00000436327 1006 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 AL138799.3-201ENST00000438968 350 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 Z95327.1-201ENST00000446082 482 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.67□□□□□ -1.98
SDCBPO00560 RN7SL293P-201ENST00000481765 281 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 AC021678.1-201ENST00000505195 936 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 SNX5P1-201ENST00000505757 1041 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 MTATP6P22-201ENST00000507369 598 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 SOD1P3-201ENST00000518682 454 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 NCAPGP2-201ENST00000557911 754 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.67□□□□□ -1.98
SDCBPO00560 AP003117.2-201ENST00000606010 545 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 AL356490.1-201ENST00000623079 479 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 MTCO1P12-201ENST00000414273 1543 ntBASIC2.67□□□□□ -1.98
SDCBPO00560 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SDCBPO00560 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.67□□□□□ -1.98
SDCBPO00560 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.67□□□□□ -1.98
SDCBPO00560 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SDCBPO00560 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SDCBPO00560 AL118496.1-201ENST00000440201 1812 ntBASIC2.66□□□□□ -1.98
SDCBPO00560 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SDCBPO00560 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SDCBPO00560 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SDCBPO00560 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.66□□□□□ -1.98
SDCBPO00560 TAF9BP1-201ENST00000396646 746 ntBASIC2.66□□□□□ -1.98
SDCBPO00560 CCNB2P1-201ENST00000399411 1150 ntBASIC2.66□□□□□ -1.98
SDCBPO00560 ARL4AP4-201ENST00000434170 518 ntBASIC2.66□□□□□ -1.98
SDCBPO00560 AC244505.4-201ENST00000434905 287 ntBASIC2.66□□□□□ -1.98
SDCBPO00560 SSXP5-201ENST00000443473 287 ntBASIC2.66□□□□□ -1.98
SDCBPO00560 RPL31P53-201ENST00000457065 348 ntBASIC2.66□□□□□ -1.98
SDCBPO00560 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.66□□□□□ -1.98
SDCBPO00560 RPL21P13-201ENST00000488305 481 ntBASIC2.66□□□□□ -1.98
SDCBPO00560 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.66□□□□□ -1.98
SDCBPO00560 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.66□□□□□ -1.98
SDCBPO00560 AC002456.2-201ENST00000509356 380 ntBASIC2.66□□□□□ -1.98
SDCBPO00560 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.66□□□□□ -1.98
SDCBPO00560 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.66□□□□□ -1.98
SDCBPO00560 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.66□□□□□ -1.98
SDCBPO00560 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.66□□□□□ -1.98
SDCBPO00560 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.66□□□□□ -1.98
SDCBPO00560 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.66□□□□□ -1.98
SDCBPO00560 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.66□□□□□ -1.98
SDCBPO00560 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC2.66□□□□□ -1.98
SDCBPO00560 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.66□□□□□ -1.98
SDCBPO00560 RPL23AP61-201ENST00000623642 466 ntBASIC2.66□□□□□ -1.98
SDCBPO00560 AC138649.5-201ENST00000637456 137 ntBASIC2.66□□□□□ -1.98
SDCBPO00560 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
SDCBPO00560 AC008264.2-201ENST00000610193 3731 ntBASIC2.66□□□□□ -1.98
SDCBPO00560 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SDCBPO00560 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SDCBPO00560 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SDCBPO00560 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
SDCBPO00560 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SDCBPO00560 MTND5P19-201ENST00000424872 1794 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SDCBPO00560 RNU1-33P-201ENST00000364249 162 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.65□□□□□ -1.99
SDCBPO00560 RNU2-37P-201ENST00000410695 177 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms