Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
O00370 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
O00370 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.12□□□□□ -1.75
O00370 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.12□□□□□ -1.75
O00370 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
O00370 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
O00370 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
O00370 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
O00370 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
O00370 RNU6-1293P-201ENST00000384077 107 ntBASIC4.11□□□□□ -1.75
O00370 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
O00370 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.11□□□□□ -1.75
O00370 RNU6-584P-201ENST00000410350 95 ntBASIC4.11□□□□□ -1.75
O00370 RNU6-77P-201ENST00000410554 91 ntBASIC4.11□□□□□ -1.75
O00370 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.11□□□□□ -1.75
O00370 LIPT1P1-201ENST00000415870 1186 ntBASIC4.11□□□□□ -1.75
O00370 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.11□□□□□ -1.75
O00370 SFR1P2-201ENST00000421841 730 ntBASIC4.11□□□□□ -1.75
O00370 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
O00370 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.11□□□□□ -1.75
O00370 AC002542.1-201ENST00000440683 193 ntBASIC4.11□□□□□ -1.75
O00370 AL050341.1-201ENST00000447743 313 ntBASIC4.11□□□□□ -1.75
O00370 AL009048.1-201ENST00000450437 298 ntBASIC4.11□□□□□ -1.75
O00370 MRPL35P4-201ENST00000453682 566 ntBASIC4.11□□□□□ -1.75
O00370 MTCO3P20-201ENST00000454926 688 ntBASIC4.11□□□□□ -1.75
O00370 OR9M1P-201ENST00000459641 921 ntBASIC4.11□□□□□ -1.75
O00370 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
O00370 AC087385.1-201ENST00000475062 312 ntBASIC4.11□□□□□ -1.75
O00370 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.11□□□□□ -1.75
O00370 AC119751.1-201ENST00000513357 765 ntBASIC4.11□□□□□ -1.75
O00370 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.11□□□□□ -1.75
O00370 AC008494.2-201ENST00000514544 370 ntBASIC4.11□□□□□ -1.75
O00370 AC110760.3-202ENST00000515177 371 ntBASIC4.11□□□□□ -1.75
O00370 RN7SKP277-201ENST00000516895 283 ntBASIC4.11□□□□□ -1.75
O00370 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.11□□□□□ -1.75
O00370 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.11□□□□□ -1.75
O00370 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.11□□□□□ -1.75
O00370 OR4A12P-201ENST00000530847 918 ntBASIC4.11□□□□□ -1.75
O00370 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.11□□□□□ -1.75
O00370 AL442163.2-201ENST00000553912 710 ntBASIC4.11□□□□□ -1.75
O00370 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
O00370 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.11□□□□□ -1.75
O00370 uc_338.32-201ENST00000615087 172 ntBASIC4.11□□□□□ -1.75
O00370 RNU6-156P-201ENST00000621869 107 ntBASIC4.11□□□□□ -1.75
O00370 AC004943.3-201ENST00000624116 600 ntBASIC4.11□□□□□ -1.75
O00370 AF001550.2-201ENST00000636643 217 ntBASIC4.11□□□□□ -1.75
O00370 AC138649.5-201ENST00000637456 137 ntBASIC4.11□□□□□ -1.75
O00370 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
O00370 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.11□□□□□ -1.75
O00370 ZNF663P-202ENST00000641770 1131 ntBASIC4.11□□□□□ -1.75
O00370 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
O00370 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.11□□□□□ -1.75
O00370 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
O00370 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
O00370 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.1□□□□□ -1.75
O00370 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
O00370 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
O00370 RNU6-224P-201ENST00000384055 107 ntBASIC4.1□□□□□ -1.75
O00370 U1.1-201ENST00000384101 164 ntBASIC4.1□□□□□ -1.75
O00370 ZNF602P-201ENST00000405929 924 ntBASIC4.1□□□□□ -1.75
O00370 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.1□□□□□ -1.75
O00370 MTND4P3-201ENST00000417829 541 ntBASIC4.1□□□□□ -1.75
O00370 AC106883.1-201ENST00000418805 562 ntBASIC4.1□□□□□ -1.75
O00370 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.1□□□□□ -1.75
O00370 USP9YP21-201ENST00000420603 432 ntBASIC4.1□□□□□ -1.75
O00370 RPL21P110-201ENST00000433345 446 ntBASIC4.1□□□□□ -1.75
O00370 CKS1BP5-201ENST00000434172 273 ntBASIC4.1□□□□□ -1.75
O00370 AC092809.1-201ENST00000441469 474 ntBASIC4.1□□□□□ -1.75
O00370 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.1□□□□□ -1.75
O00370 NAP1L1P3-201ENST00000462291 880 ntBASIC4.1□□□□□ -1.75
O00370 AP000873.1-201ENST00000463987 400 ntBASIC4.1□□□□□ -1.75
O00370 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.1□□□□□ -1.75
O00370 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.1□□□□□ -1.75
O00370 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.1□□□□□ -1.75
O00370 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.1□□□□□ -1.75
O00370 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.1□□□□□ -1.75
O00370 OR10V3P-201ENST00000525712 725 ntBASIC4.1□□□□□ -1.75
O00370 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
O00370 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.1□□□□□ -1.75
O00370 AC084824.1-201ENST00000550917 1005 ntBASIC4.1□□□□□ -1.75
O00370 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.1□□□□□ -1.75
O00370 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.1□□□□□ -1.75
O00370 AC090877.1-201ENST00000561418 344 ntBASIC4.1□□□□□ -1.75
O00370 MIR4286-201ENST00000580651 93 ntBASIC4.1□□□□□ -1.75
O00370 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.1□□□□□ -1.75
O00370 MIR4760-201ENST00000585040 80 ntBASIC4.1□□□□□ -1.75
O00370 VN1R85P-201ENST00000601587 426 ntBASIC4.1□□□□□ -1.75
O00370 AL049634.3-201ENST00000604968 457 ntBASIC4.1□□□□□ -1.75
O00370 AL034351.1-201ENST00000605288 668 ntBASIC4.1□□□□□ -1.75
O00370 AC034229.4-201ENST00000607861 441 ntBASIC4.1□□□□□ -1.75
O00370 AC018926.3-201ENST00000618841 406 ntBASIC4.1□□□□□ -1.75
O00370 U7.8-201ENST00000619968 63 ntBASIC4.1□□□□□ -1.75
O00370 FP236240.3-201ENST00000623061 327 ntBASIC4.1□□□□□ -1.75
O00370 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.1□□□□□ -1.75
O00370 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.1□□□□□ -1.75
O00370 MIR4496-201ENST00000635896 61 ntBASIC4.1□□□□□ -1.75
O00370 FAM157B-203ENST00000639350 358 ntBASIC4.1□□□□□ -1.75
O00370 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
O00370 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.1□□□□□ -1.75
O00370 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms