Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC018692.3-201ENST00000623929 123 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC005183.1-201ENST00000603687 1979 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC021755.1-201ENST00000559747 1447 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC092326.2-201ENST00000624772 1561 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 AC073325.2-201ENST00000339545 159 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 SNORA7.4-201ENST00000384249 137 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 ARL4AP4-201ENST00000434170 518 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 SETP5-201ENST00000437270 562 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 Z95327.1-201ENST00000446082 482 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 RPS20P32-201ENST00000456044 356 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 RN7SL633P-201ENST00000488974 297 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 OR5D17P-201ENST00000531492 978 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 RN7SL339P-201ENST00000580597 296 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 AC099778.2-201ENST00000610904 211 ntBASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV27A0A087WT01 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 MTND5P19-201ENST00000424872 1794 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 MIR449B-201ENST00000384995 97 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 HMGB1P10-201ENST00000395823 563 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 ATP5F1P3-201ENST00000397213 657 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 RPL7P25-201ENST00000404151 721 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC005326.1-201ENST00000429197 123 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 NEK4P1-201ENST00000433383 879 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 RPS7P5-201ENST00000441482 581 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 RPL21P133-201ENST00000443666 476 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 BTF3P5-201ENST00000457252 467 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 RPL21P41-201ENST00000459863 264 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 RN7SL283P-201ENST00000489055 303 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC111000.5-201ENST00000506559 1178 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 RNA5SP380-201ENST00000517190 98 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 DUXAP2-201ENST00000519198 589 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC025260.1-201ENST00000548858 430 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AL845331.3-202ENST00000562856 261 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC005242.1-201ENST00000585658 438 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC007318.2-201ENST00000620999 243 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC145207.9-201ENST00000623802 325 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AP003072.5-201ENST00000623872 773 ntBASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.74□□□□□ -1.97
TRAV27A0A087WT01 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 GSTA12P-201ENST00000402398 508 ntBASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 RPL31P45-201ENST00000419532 356 ntBASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 AL353678.1-201ENST00000422735 741 ntBASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 ELOCP6-201ENST00000429066 328 ntBASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 AC244505.4-201ENST00000434905 287 ntBASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 SSXP5-201ENST00000443473 287 ntBASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 HMGN2P21-201ENST00000447764 270 ntBASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 PRDX3P3-201ENST00000447765 522 ntBASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.73□□□□□ -1.97
TRAV27A0A087WT01 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms