Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Gm45058-201ENSMUST00000205810 766 ntBASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn9Q9Z0S7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cldn9Q9Z0S7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cldn9Q9Z0S7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cldn9Q9Z0S7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Gm11336-201ENSMUST00000118168 334 ntBASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Gm10252-201ENSMUST00000209541 832 ntBASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn9Q9Z0S7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Gm15565-201ENSMUST00000118890 427 ntBASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Gm18421-201ENSMUST00000204122 625 ntBASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn9Q9Z0S7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Gm26039-201ENSMUST00000158152 144 ntBASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Cldn9Q9Z0S7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn9Q9Z0S7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn9Q9Z0S7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn9Q9Z0S7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn9Q9Z0S7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn9Q9Z0S7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn9Q9Z0S7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms