Protein–RNA interactions for Protein: Q9QY39

Pdzd4, PDZ domain-containing protein 4, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd4Q9QY39 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.74■□□□□ 0.43
Pdzd4Q9QY39 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Mir770-201ENSMUST00000103252 94 ntBASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pdzd4Q9QY39 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Haglr-201ENSMUST00000100000 2085 ntBASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Phf7-203ENSMUST00000226565 1971 ntBASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.72■□□□□ 0.43
Pdzd4Q9QY39 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pdzd4Q9QY39 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Pdzd4Q9QY39 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pdzd4Q9QY39 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pdzd4Q9QY39 Gm13186-201ENSMUST00000118031 316 ntBASIC17.71■□□□□ 0.43
Pdzd4Q9QY39 Gm6623-201ENSMUST00000173570 544 ntBASIC17.71■□□□□ 0.43
Pdzd4Q9QY39 Gm27704-201ENSMUST00000185094 107 ntBASIC17.71■□□□□ 0.43
Pdzd4Q9QY39 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdzd4Q9QY39 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdzd4Q9QY39 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdzd4Q9QY39 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdzd4Q9QY39 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pdzd4Q9QY39 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdzd4Q9QY39 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms