Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 AL121829.2-201ENST00000620908 328 ntBASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 AC006333.2-201ENST00000607957 2099 ntBASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NLRC4Q9NPP4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 KRT18P16-201ENST00000510337 1294 ntBASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 CROCCP3-202ENST00000420820 1947 ntBASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLRC4Q9NPP4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 AL355802.2-201ENST00000402069 882 ntBASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.85■□□□□ 0.93
NLRC4Q9NPP4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 TUBB8P6-201ENST00000436895 1288 ntBASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 UNC93B4-201ENST00000505679 747 ntBASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NLRC4Q9NPP4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms