Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chaf1bQ9D0N7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 Gm10517-202ENSMUST00000192970 758 ntBASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chaf1bQ9D0N7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Chaf1bQ9D0N7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chaf1bQ9D0N7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chaf1bQ9D0N7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chaf1bQ9D0N7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.52■□□□□ 0.07
Chaf1bQ9D0N7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chaf1bQ9D0N7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Chaf1bQ9D0N7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chaf1bQ9D0N7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chaf1bQ9D0N7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chaf1bQ9D0N7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Gm12382-201ENSMUST00000122005 922 ntBASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Gm13158-201ENSMUST00000122007 736 ntBASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Gm27405-201ENSMUST00000184201 112 ntBASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chaf1bQ9D0N7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.5■□□□□ 0.07
Chaf1bQ9D0N7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms