Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPG11Q96JI7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPG11Q96JI7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.33■□□□□ 0.21
SPG11Q96JI7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPG11Q96JI7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.33■□□□□ 0.2
SPG11Q96JI7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPG11Q96JI7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPG11Q96JI7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SPG11Q96JI7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.33■□□□□ 0.2
SPG11Q96JI7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.33■□□□□ 0.2
SPG11Q96JI7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPG11Q96JI7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.33■□□□□ 0.2
SPG11Q96JI7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPG11Q96JI7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPG11Q96JI7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPG11Q96JI7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPG11Q96JI7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPG11Q96JI7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.33■□□□□ 0.2
SPG11Q96JI7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPG11Q96JI7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPG11Q96JI7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPG11Q96JI7 SLC25A6P4-201ENST00000586535 553 ntBASIC16.33■□□□□ 0.2
SPG11Q96JI7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SPG11Q96JI7 AC092329.2-201ENST00000598402 547 ntBASIC16.33■□□□□ 0.2
SPG11Q96JI7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPG11Q96JI7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.32■□□□□ 0.2
SPG11Q96JI7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SPG11Q96JI7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SPG11Q96JI7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPG11Q96JI7 AC022898.2-201ENST00000616822 1312 ntBASIC16.32■□□□□ 0.2
SPG11Q96JI7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPG11Q96JI7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SPG11Q96JI7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPG11Q96JI7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPG11Q96JI7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.32■□□□□ 0.2
SPG11Q96JI7 HMGN1P19-201ENST00000436976 333 ntBASIC16.32■□□□□ 0.2
SPG11Q96JI7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SPG11Q96JI7 AC011498.5-201ENST00000592027 486 ntBASIC16.32■□□□□ 0.2
SPG11Q96JI7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPG11Q96JI7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SPG11Q96JI7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.32■□□□□ 0.2
SPG11Q96JI7 LINC01311-201ENST00000565162 1445 ntBASIC16.32■□□□□ 0.2
SPG11Q96JI7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.32■□□□□ 0.2
SPG11Q96JI7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.32■□□□□ 0.2
SPG11Q96JI7 AC007225.1-201ENST00000566331 1836 ntBASIC16.32■□□□□ 0.2
SPG11Q96JI7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPG11Q96JI7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPG11Q96JI7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 AL160286.2-201ENST00000567150 934 ntBASIC16.31■□□□□ 0.2
SPG11Q96JI7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 AL049796.1-201ENST00000565336 1766 ntBASIC16.31■□□□□ 0.2
SPG11Q96JI7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SPG11Q96JI7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPG11Q96JI7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPG11Q96JI7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.3■□□□□ 0.2
SPG11Q96JI7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPG11Q96JI7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPG11Q96JI7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPG11Q96JI7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.3■□□□□ 0.2
SPG11Q96JI7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SPG11Q96JI7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SPG11Q96JI7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPG11Q96JI7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.3■□□□□ 0.2
SPG11Q96JI7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.3■□□□□ 0.2
SPG11Q96JI7 PRELID1P1-202ENST00000567272 903 ntBASIC16.3■□□□□ 0.2
SPG11Q96JI7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPG11Q96JI7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.3■□□□□ 0.2
SPG11Q96JI7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.3■□□□□ 0.2
SPG11Q96JI7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.3■□□□□ 0.2
SPG11Q96JI7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPG11Q96JI7 AL691432.2-201ENST00000607222 2038 ntBASIC16.3■□□□□ 0.2
SPG11Q96JI7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.3■□□□□ 0.2
SPG11Q96JI7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms