Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Gm10138-203ENSMUST00000206952 366 ntBASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Mir6982-201ENSMUST00000184354 68 ntBASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb3Q91XZ7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb3Q91XZ7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Gm29791-202ENSMUST00000207888 369 ntBASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb3Q91XZ7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms